Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60470 |
Symbol | ispB |
ID | 4385740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5389330 |
End bp | 5390298 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327479 |
Product | octaprenyl-diphosphate synthase |
Protein accession | YP_793028 |
Protein GI | 116052711 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.456687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0384277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCC AGGCCTTCTA CCGCGTGGTG GCGGAAGATT TCACCGCCGT CGACGGGATC ATCCGTCGCC AACTCACCTC CCGCGTTCCC CTGGTGGAAA AGATCGGCGA CTACATCATC TCCGCCGGCG GCAAGCGCCT GCGTCCGCTG CTGGTCCTGC TCGCCGGCAA GACCCTGGGC TACAAGGGCG ACGACCTCTG CCTGCTGGCC GCCACCATCG AATTCCTGCA CACCTCCACT CTGCTGCACG ACGACGTCGT CGACGCCTCC GGCCTGCGCC GCGGCCGCTC CACCGCCAAT GCCCTGTGGG GCAACGCGCC GAGCGTGCTG GTAGGCGACT TCCTTTATGC CCGCTCCTTC GAAATGATGG TCGAGCTGGG TTCCATGCCG GTCATGCGCA TCATATCCCA GGCCACCCGG GTGATCGCCG AGGGCGAAGT GCTGCAATTG TCCAAGGTAC GCGACGCCAG CACTACCGAA GAGACCTACA TGGAAGTGAT CCGCGGCAAG ACCGCGATGC TTTTCGAGGC CTCGACCCAC AGCGCCGCCG CGCTGTGCCA GGCCGGCGAG GAACAGTCCG AGGCACTGCG CCGCTTCGGC GACTACCTGG GAATCGCCTT CCAACTGGTG GACGACCTGC TCGACTACCG CGGCGACGCC GCGACCCTCG GCAAGAACGT CGGCGACGAC CTCGCCGAAG GCAAGCCCAC CCTGCCGCTG ATCGTCACCA TGCGCGACGG CACCGAGGAG CAGGCCGCGC TGGTACGCAA GGCCATCCAG CAAGGCGGCA GCCAGGACCT GGAGAGCGTC TGTGCCGCCG TCGAGGCTGC CGGCGCCCTG GACTATACCG CCAACCTCGC CCGCGACTAC GCCGCCCGCG CCATCGCCTG CCTGGATACG CTGCCGGACA ACGAATACCG CTCCGCCCTG GTCGAACTCA GCGAATTCGC TGTCGCCCGT ACCCACTGA
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Protein sequence | MQPQAFYRVV AEDFTAVDGI IRRQLTSRVP LVEKIGDYII SAGGKRLRPL LVLLAGKTLG YKGDDLCLLA ATIEFLHTST LLHDDVVDAS GLRRGRSTAN ALWGNAPSVL VGDFLYARSF EMMVELGSMP VMRIISQATR VIAEGEVLQL SKVRDASTTE ETYMEVIRGK TAMLFEASTH SAAALCQAGE EQSEALRRFG DYLGIAFQLV DDLLDYRGDA ATLGKNVGDD LAEGKPTLPL IVTMRDGTEE QAALVRKAIQ QGGSQDLESV CAAVEAAGAL DYTANLARDY AARAIACLDT LPDNEYRSAL VELSEFAVAR TH
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