Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_60360 |
Symbol | lspA |
ID | 4385731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5378913 |
End bp | 5379422 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639327469 |
Product | lipoprotein signal peptidase |
Protein accession | YP_793018 |
Protein GI | 116052702 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000000409977 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTGAGG TCGATCGTTT CGGGCGCTTG CCCTGGCTGT GGATCACCGT GCTGGTGTTC GTCCTCGACC AGCTCAGCAA GGCGTTCTTC CAGGCCGAAC TGAGCATGTA CCAGCAGATC GTGGTGATCC CCGATCTGTT CAGTTGGACC CTGGCCTACA ACACCGGTGC CGCCTTCAGC TTCCTGGCCG ACAGCTCGGG CTGGCAGCGC TGGCTGTTCG CCCTGATCGC CATCGTCGTC AGCGCGATCC TGGTGGTCTG GCTGAAACGC CTGAAGAAAG GCGAGACCTG GTTGGCCATC GCCCTGGCGC TGGTGCTCGG TGGCGCCCTG GGCAACCTCT ACGACCGCAT GGTTCTTGGC CACGTGGTGG ACTTCATCCT GGTGCACTGG CAGAACCGCT GGTACTTCCC GGCGTTCAAC CTGGCCGATA GCGCCATCAC CGTCGGCGCC GTCATGTTGG CGCTCGACAT GTTCAGATCG AAGAAATCCG GAGAAGCCGC CCATGGCTGA
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Protein sequence | MPEVDRFGRL PWLWITVLVF VLDQLSKAFF QAELSMYQQI VVIPDLFSWT LAYNTGAAFS FLADSSGWQR WLFALIAIVV SAILVVWLKR LKKGETWLAI ALALVLGGAL GNLYDRMVLG HVVDFILVHW QNRWYFPAFN LADSAITVGA VMLALDMFRS KKSGEAAHG
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