| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_60330 |
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| Symbol | ispH |
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| ID | 4385729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5377450 |
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| End bp | 5378394 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327467 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_793016 |
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| Protein GI | 116052700 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000141946 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATCA AACTCGCCAA TCCCCGCGGC TTCTGCGCCG GCGTGGATCG CGCCATCGAG
ATCGTCAACC GTGCCCTCGA TGTCTTCGGC CCGCCGATCT ACGTGCGTCA CGAGGTGGTG
CACAACAAGT TCGTCGTGGA CAACCTGCGC CAGCGCGGCG CCATCTTCGT CGAGGAACTC
GATCAGGTGC CGGACAACGT CATCGTCATC TTCAGCGCCC ACGGCGTTTC CCAGGCGGTC
CGCAAGGAAG CCGAGGGGCG CGGCCTGAAG GTTTTCGACG CGACCTGCCC GCTGGTGACC
AAGGTGCACA TGGAAGTGGT GCGCTACAGC CGCGACGGCC ACGAATGCGT GCTGATCGGG
CATGAAGGCC ACCCCGAGGT GGAAGGCACC ATGGGCCAGT ACGATGCCAG CAACGGCGGT
GCCATCTACC TGGTGGAGGA CGAGGCCGAC GTCGCCGCGC TGGAGGTGCG CAAGCCCGAA
GCCCTGCACT ACGTGACCCA GACCACCCTG TCGATGGACG ACACCTCGAA GGTCATCGAT
GCCCTGCGCG CCAAGTTCCC GCAGATCCAG GGGCCGCGCA AGAACGACAT CTGCTATGCC
ACCCAGAACC GCCAGGATGC CGTGAAGGAA CTGGCCGACC AGTGCGACAT GGTCCTGGTG
GTGGGCAGCC CCAACAGTTC CAACTCCAAC CGCCTGCGCG AACTCGCCGA GCGCATGGGC
ACGCCGGCCT ACCTGATCGA CGGCGCCGAG GACATGCAAC GCGGCTGGTT CGACGGTGTG
CGTCGCATCG GAATCACCGC AGGCGCCTCC GCGCCGGAAG TGCTGGTGCG CGGAGTGATC
GCCCAGCTAC GTGAGTGGGG GGCGTCGGAA GAGCAGGAAC TGGAGGGACG GGAGGAGAAC
ATTACCTTCT CGATGCCCAA GGAACTGCGG GTCAAGGCTT TGTAA
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| Protein sequence | MQIKLANPRG FCAGVDRAIE IVNRALDVFG PPIYVRHEVV HNKFVVDNLR QRGAIFVEEL
DQVPDNVIVI FSAHGVSQAV RKEAEGRGLK VFDATCPLVT KVHMEVVRYS RDGHECVLIG
HEGHPEVEGT MGQYDASNGG AIYLVEDEAD VAALEVRKPE ALHYVTQTTL SMDDTSKVID
ALRAKFPQIQ GPRKNDICYA TQNRQDAVKE LADQCDMVLV VGSPNSSNSN RLRELAERMG
TPAYLIDGAE DMQRGWFDGV RRIGITAGAS APEVLVRGVI AQLREWGASE EQELEGREEN
ITFSMPKELR VKAL
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