| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_60310 |
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| Symbol | pilY1 |
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| ID | 4385727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5373154 |
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| End bp | 5376630 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639327465 |
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| Product | type 4 fimbrial biogenesis protein PilY1 |
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| Protein accession | YP_793014 |
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| Protein GI | 116052698 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00000469014 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCACC AGATTACCCG CGCAGGAAAA AGCCTGCTGG CTGCAGGTTG CACCCTGAGC
ATCCTGTTCG CCTCTGACAG TTATGCCGCC ACGGCCCTGA ATGTCAGCCA GCAACCCCTG
TTCCTAACCC AGGGCGTTGC TCCCAACCTG CTGTTCACTC TAGATGACTC AGGCAGTATG
GCCTGGGCTT ACGTGCCCGA CGGTATTAGC GGGAATAGCG GCAGAGCGGG ACGTTCCAGC
GATTACAACG CACTGTACTA CAACCCCGAT TATGCTTACC AAGTGCCCAA GAAATTGACA
CTGTCAGGCG ATCAGATCAT CGTTTCCGAC TATCCAGTGC CACGCTTCAC AGCAGCCTGG
CAGGATGGCT ACGCCCAAGG CTCCACCACC AACCTGAGCA ATAACTATCG CCCTCAATGG
GGAACCGGCT GGCTTGGTTG CATCGATAGC AGCTGCAATA CCGGGAGAGC TTATTACTAT
ACTTATAAGG TAAGCGCTAG CTGCCCTGCA CAGCCGGTGA GCAGCTCCAA CTCCTGTTAT
ACCTACAATG CTCTTCCTAC CAGTCAGGAA AGCAACTTTG CGATATGGTA CTCCTACTAT
CGCAACCGCA TCCTGGCCAC AAAGACCGCT GCCAACCTGG CCTTTTACAG CCTGCCGGAA
AACGTGCGTC TCACTTGGGG GGCCCTGAAC ACCTGTAGCA TCGGCGCCAA CAGCAGAAGC
TGCCAAAACA ATGCCCTGCT CCAATTCAAC AAGCAGCACA AAATCAATTT CTTCAATTGG
CTGGCGAACA GCCCGGCCAG CGGCGGTACT CCTCTGCATG CGGCTCTTGA CCGAGCCGGA
CGCTTCTTGC AAACCAACGG CACAGCTTAT ACCACCGAAG ACGGAAAGAC ATATTCCTGC
CGGGCCAGCT ATCACATCAT GATGACCGAC GGTATCTGGA ACGGTCGGAA CGTCACCCCC
GGCAATCTCG ACAACCAGAA CCAGACCTTT CCTGATAGCA CCCTCTATAG GCCACAGCCC
CCTTATGCCG ACAGCAATGC CAGCTCATTG GCTGACCTGG CTTTCAAATA CTGGACCACA
GACTTACGTC CCAGCATCGA CAATGACCTG AAGCCTTTCA TGGCCTACAA GAGTGGGGAC
GATTCCAAGG ATTACTGGGA CCCTCGCAAC AACCCAGCCA CTTGGCAACA CATGGTCAAC
TTTACCGTTG GCCTAGGTCT TTCCTATTCG CTCACATTGA ACTCTGCACC AACTTGGACA
GGCAGCACCT TTGGCAACTA CGAGGAGTTG ATGGCTGGAA GCAAGGCTTG GCCCAGCGTC
GATAACGACG CCGCACCCGG TAACGTCTAC GACCTCTGGC ATGCAGCTAT CAACTCTCGT
GGAGACTTCT TTAGCGCGGA ATCACCGGAC TCTCTGGTTC AGGCTTTCAA TAAGATCCTG
ACACGGATTT CCGAGCGCAA CACCTCCTCC TCCAAACCAG CAATGACTTC CGCGCTGCAG
GATGACGGAA CCGGCGACAA GCTGATCCGC TACAGCTACC AGTCCAGCTT TGCCAGTGAC
AAGAACTGGG CGGGCGACCT TATACGTTAC AAGGTGGAGT CGACTTCCAC CGGTTCGACC
AAAACCCAGG AATGGAGCGC CGGCGCACTG CTGGACAACC GAGCTCCCGC TACCCGTAAT
ATTTACATCG CCAGCAATAG CGGAACCAAC CGCCTTAAGC CTTTCACATG GAGCAATATT
GAGGGAAGTC AGTTAGCCAC TTGGCTGAAC CGCAACCCGG ACAAGGACAA TCAGGCCGAC
ACCAAAGGAG CACAGCGGGT CGACTTCATC CGTGGCCAGC AGAATATGGA TGGATTCCGG
CAACGACAGG CGGTGTTAGG GGACATCGTG CACTCGTCTC CAGCCGTGGT CGGACCGGCC
CAATACCTCA CTTATCTGGC CAACCCCATC GAACCCAGCG GCGACTACGG CACATTCAAG
ACAGAGGCAG ACCAGCGCAG CCCTAGAGTT TATGTTGGAT CCAACGATGG CATGTTGCAT
GGTTTCAACA TCAAAACCGG CGTGGAAGAG TTCGCTTTCA TCCCTACAGC AGTATTCGAA
AAGCTTAACA AGCTTACCGG CATCAGCTAC CAGGGCGGTG CCCACCAATA TTTCGTCGAC
GCTACACCGG TCGTCAGCGA TGCCTTTTTC GATGGAGCTT GGCACACTGT TCTGATCGGA
ACGCTTGGTG CTGGAGGTCG CGGCCTGTTC GCACTCGATG TAACCAAGCC GGACGATGTC
AAGCTGCTTT GGGAATACGA TAGCAGTACC GACTCGGACC TTGGTTACAC CTTCTCCAAA
CCTACCGTAG CCAGACTGCA CAGCGGACAA TGGGCAGTAG TTACCGGCAA CGGCTATGGA
AGCGATAATG ACAAGGCAGC TTTACTGCTG ATTGATTTGA AAAAGGGAAC GCTGATCAAG
AAGCTGGAAG TCCAAAGCGA GCGCGGAATA GCCAATGGCC TATCGACGCC TCGCCTGGCT
GATAACAACA GCGATGGCAT TGCTGACTAC GCCTATGCTG GCGATCTGCA GGGAAATATC
TGGCGCTTCG ATTTGATCGG CAATACCCGC AACGACGACC CAGACACAAA TACCTCTATC
AATCCCTTCA AGCCCGGAGA TGTAGATCCT TCTGCTTTCA GAGTATCGTT CAGCGGCGCC
CCGCTTTTCC GTGCTCGCGC CGACAACAAT ACTCGTCAGC CCATCACGGC TCCGCCTACC
TTGGTACGCC ATCCTAGCCG TAAGGGCTAC ATCGTCATCG TAGGTACAGG AAAATACTTC
GAGGACGATG ACGCTCAGGC CGATACCAGC CGAGCCATGA CGCTCTATGG TATCTGGGAT
CGCCAGACCA AGGGCGAAAG CGCAAACAGT ACCCCAACCA TCGACCGCAA CGCCCTCACA
GCCCAAACCA TGACAACAGA GGCGAACTCC ACATTCGGTA GCGTGAACAG GAATATTCGG
CTTATTAGCC AAAACCCGGT GAAGTGGTAC AAAGACGGAG CAACCGGTAC CGCGAACTCG
GATGTGGCTA GCTATGGCTG GCGACTGAAT CTGGAGGTCA ATAGCAGCAA GAAAGGCGAA
ATGATGATCG AAGATATGTT CGCTGCCGGC CAAGTGCTTC TATTGCAGAC CTTGACACCG
AACGACGACC CTTGTGACAG CGGCTCTACC AGCTGGACCT ACGGCCTCAA TCCATATACT
GGCGGACGTA CCAGTTTCAC CGTCTTCGAT CTCAAACGTG CGGGTATAGT GGACTCTGGC
TCGGATTACA ACGGCTCGGT CGTATCCGCC TTCCAACAGG ATGGACTAGG TGGCTTGGCC
ATTACCCAGA ACGAACAGCG TCAATCCGAG GCTTGCACTG GTGATGAGTG CATCATCTTC
AACCCCAGCG ACAAGAGTAA CGGACGACAA ACCTGGCGGG TCGTCGAGGA GAAATGA
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| Protein sequence | MIHQITRAGK SLLAAGCTLS ILFASDSYAA TALNVSQQPL FLTQGVAPNL LFTLDDSGSM
AWAYVPDGIS GNSGRAGRSS DYNALYYNPD YAYQVPKKLT LSGDQIIVSD YPVPRFTAAW
QDGYAQGSTT NLSNNYRPQW GTGWLGCIDS SCNTGRAYYY TYKVSASCPA QPVSSSNSCY
TYNALPTSQE SNFAIWYSYY RNRILATKTA ANLAFYSLPE NVRLTWGALN TCSIGANSRS
CQNNALLQFN KQHKINFFNW LANSPASGGT PLHAALDRAG RFLQTNGTAY TTEDGKTYSC
RASYHIMMTD GIWNGRNVTP GNLDNQNQTF PDSTLYRPQP PYADSNASSL ADLAFKYWTT
DLRPSIDNDL KPFMAYKSGD DSKDYWDPRN NPATWQHMVN FTVGLGLSYS LTLNSAPTWT
GSTFGNYEEL MAGSKAWPSV DNDAAPGNVY DLWHAAINSR GDFFSAESPD SLVQAFNKIL
TRISERNTSS SKPAMTSALQ DDGTGDKLIR YSYQSSFASD KNWAGDLIRY KVESTSTGST
KTQEWSAGAL LDNRAPATRN IYIASNSGTN RLKPFTWSNI EGSQLATWLN RNPDKDNQAD
TKGAQRVDFI RGQQNMDGFR QRQAVLGDIV HSSPAVVGPA QYLTYLANPI EPSGDYGTFK
TEADQRSPRV YVGSNDGMLH GFNIKTGVEE FAFIPTAVFE KLNKLTGISY QGGAHQYFVD
ATPVVSDAFF DGAWHTVLIG TLGAGGRGLF ALDVTKPDDV KLLWEYDSST DSDLGYTFSK
PTVARLHSGQ WAVVTGNGYG SDNDKAALLL IDLKKGTLIK KLEVQSERGI ANGLSTPRLA
DNNSDGIADY AYAGDLQGNI WRFDLIGNTR NDDPDTNTSI NPFKPGDVDP SAFRVSFSGA
PLFRARADNN TRQPITAPPT LVRHPSRKGY IVIVGTGKYF EDDDAQADTS RAMTLYGIWD
RQTKGESANS TPTIDRNALT AQTMTTEANS TFGSVNRNIR LISQNPVKWY KDGATGTANS
DVASYGWRLN LEVNSSKKGE MMIEDMFAAG QVLLLQTLTP NDDPCDSGST SWTYGLNPYT
GGRTSFTVFD LKRAGIVDSG SDYNGSVVSA FQQDGLGGLA ITQNEQRQSE ACTGDECIIF
NPSDKSNGRQ TWRVVEEK
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