Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_59900 |
Symbol | |
ID | 4382751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5333604 |
End bp | 5334263 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639327426 |
Product | hypothetical protein |
Protein accession | YP_792978 |
Protein GI | 116052662 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.101829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000000000141059 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTCA GAAAACACAC TGCGCAACAG CAGGCACACA TCAACACCTT CCGGTTCATC ACCGGCTTCC TGTGCATGGT CATCGTTGTG CTGGCCTACT GCGTCTGGGA AGCCCGTAAG GACCTCTGGA TCCACATTCC GCCCGACTTG CGCTCAGGAA GCACCCGGTT GTGGTGGGAC ATTCCGCCAG AGAGCGTCTA TGCGTTCGGC CTCTACATCT TCCAGCAGGT GCAGCGTTGG CCCAAGGACG GCGAGGTGGA CTACAAGGGA AACCTGTTCC GCTACGCTGC CTACCTCACT CCCTCCTGCA AAGTCTTCCT GGAGAAAGAC TTTGAGTTTC GTCGTAACGC CGGCGAGCTC AGGGGTCGCG AGCGCACCAC CTCGGAAATC CCCGGTCGAG GCATTGGCGA GAGCAATGGC CGCGTGATCC AGCACTCGAT CAATGACTGG ACCGTCAACT TGGACATGGA CAGCACGGAG TATTACGCCG GCGAGAAGAT CAAGCGGGCG CTGGCCCGCT ACCCGTTGCA CGTTATCCGC GCCGACGTCG ACCCGGAAAC CAATCCCTTC GGCCTGCAGT GGGACTGCTA CTCCGACACG CCTCAACGTA TCGAGCTTGA GGAGCCGGCC GCCCCCACCA AGCGGGAGGG AGGTCTATGA
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Protein sequence | MSFRKHTAQQ QAHINTFRFI TGFLCMVIVV LAYCVWEARK DLWIHIPPDL RSGSTRLWWD IPPESVYAFG LYIFQQVQRW PKDGEVDYKG NLFRYAAYLT PSCKVFLEKD FEFRRNAGEL RGRERTTSEI PGRGIGESNG RVIQHSINDW TVNLDMDSTE YYAGEKIKRA LARYPLHVIR ADVDPETNPF GLQWDCYSDT PQRIELEEPA APTKREGGL
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