| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59710 |
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| Symbol | cupD1 |
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| ID | 4385467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5313527 |
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| End bp | 5314075 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327409 |
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| Product | putative fimbrial protein precursor |
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| Protein accession | YP_792961 |
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| Protein GI | 116052646 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1.45565e-17 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 1.06825e-18 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAACCTC AAAGATCTGC CCTGACTATC GCCGCATTTC TCGCATTGCC GGGTATCGCG
GCGGCTGCCA ATACCATCAC CTTCCACGGA GAAGTGACCG ACCAGACCTG TTCCGCCGTC
GTCGACGGAC GAACCGACCC GACCGTGATA CTCGACACCG TACCGGTAAG CGCTCTTGAC
GGCGCAGTCG GCAAACCCGC CGGGGAAACC AGCTTCACCC TGCAACTGAC CGGTTGCGCC
GCTCCGGCGG CCGATGCCGA GGAGCACTTC AGCGTGATGT TCCAGGCGGT CAATCCGACC
AGCGCCGGCA ATCTGACCAA TACCGCGTCC GCCGGCGCCA CCGGCGTAGC GCTGCAGCTA
CTGACGGCAC CGGGCGGCAG CGAGGTCAAT CTGGCCGGCG GGTCGGCCGT GGCTGCCGGT
GACATCGTGC TCGCAGGAGG CGAGACCAGC ACCAGCTACG ACTATGCCGT CCGCTACATC
TCCGAAGCGA CCACCGTCAC TCCGGGACCG GTGCTCGGCT CGGTGACCTA CACCCTGCGT
TACGAGTAA
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| Protein sequence | MKPQRSALTI AAFLALPGIA AAANTITFHG EVTDQTCSAV VDGRTDPTVI LDTVPVSALD
GAVGKPAGET SFTLQLTGCA APAADAEEHF SVMFQAVNPT SAGNLTNTAS AGATGVALQL
LTAPGGSEVN LAGGSAVAAG DIVLAGGETS TSYDYAVRYI SEATTVTPGP VLGSVTYTLR
YE
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