| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59690 |
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| Symbol | |
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| ID | 4385465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5310109 |
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| End bp | 5312343 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327407 |
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| Product | hypothetical protein |
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| Protein accession | YP_792959 |
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| Protein GI | 116052644 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000194089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 4.4297400000000005e-19 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTGGCC AGTACCCGTT GGAAGCGCTC TTGCGGCCTG CCGTGGAGCT CTACACCACC
ACCGTGTGCT TCACCGCAGC CGCGCTCTGC ATCGTCGCGC CGTGGACGTT CTCCCTCACT
CCGCTGTTCG GCATCGTGGC CGCGCTGTGC TTCGCCTGGC TGGGTATCGT GCGGCTGAAG
CAGGCCGGCG TGGTGCTCCG CTACCGGCGG AACATTCGCC GACTGCCGAA GTACACGATG
ACCAGCGCCG AGATGCCGGT CAGCAACGAA CACCTGTTCA TCGGTAAAGG ATTTCGCTGG
ACGCAGAAGC ATACGCAGCG CCTGGCAGAT ACCTACCTGC CCCAGTTCGC CTCTTACGTC
GAGCCCTCGC CCCTCTACGA GCGCGCGCGC CGGTTGGAGA AGCAGCTCGA GTTCGCCCCC
TTCCCCCTGA AGCTGGTCGC CAAAGCCACT GCCTGGGACG TGGCCTGGAA CCCCGCACGG
CCGCTGCCGC CCGTGGGCGG TTTGCCTCGG CTCCATGGCA TCGAGCCGCG CGAACAGGAC
GTAGGCCTGC AACTGGGCGA GCGCGTCGGC CACACACTGG TACTCGGCAC CACGCGGGTG
GGTAAGACGC GCCTCGCGGA GCTGTTCATC ACCCAGGATA TTCGCCGCAC TCACTGCCGG
GTACGACGCC GGCGGGTGAA GATGGGCCGG CGGACCCAGA CGGTTCACCA CGGCTATCGG
CGCCGGCGCG CAGAGGAGCA GCCGGACTAC GAGGTGGTGA TCGTCTTCGA CCCGAAAGGC
GACGCTGACC TGCTGAAGCG TATGTACGTG GAATGCGAAC GTGCCGGCCG CCTGGACGAG
TTCTACGTGT TCCACCTCGG TCATCCTGAC CTGTCGGCAC GCTACAACGC CGTCGGCCGG
TTCGGTCGGA TCTCCGAGGT CGCCACCCGC GTCGCCGGCC AGCTCTCCGG CGAGGGCAAC
AGCGCGGCGT TCCGCGAGTT CGCCTGGCGG TTCGTCAACA TCATCGCCCG CGCGCTGCAC
GCGCTGGGTA TCCGGCCTGA CTACCAGCAG ATCCTCCGGC ACGTCGTGAA CATCGATGCG
TTGTTCGTCG AATATGCGCA GAAATACATC AGCGAGCACG ATCCCAGGGC CTGGGACACC
ATCATCCAGA TCGAGGGCAA GCTCAACGAC AAGAACATCC CGTTCAACAT GAAAGGACGG
CCCCTGCGGG TCGTAGCCAT CGACCAGTAC CTGACACAGA AACGCATCGC CGACCCGGTC
ATGGAAGGCT TGAAGAGCGC CGTGCGCTAC GACAAGACCT ACTTCGACAA GATCGTGGCC
TCGCTGCTGC CGCTACTGGA GAAACTCACT ACCGGGCGGA TCTCGGAGCT TCTTTCGCCC
AACTACGCGG ACCTCAACGA TCCGCGGCCG ATCTTCGACT GGATGCAGGT CATCCGCAAA
CGCGCCGTGG TCTACGTCGG CCTCGACGCA CTATCGGATA CCGAGGTCGC CGCCGCGGTG
GGCAACTCCA TGTTCAGCGA CCTGGTCTCG GTAGCGGGTC ACATCTACAA GCATGGTGTC
GATGACGGCC TGCCCGGCTC GCTCGCCAGC GGCAAGGTCC GCATCAACCT GCATGCCGAC
GAGTTCAACG AGCTGATTGG CGACGAGTTC ATCCCCATGG TCAACAAAGC GGGCGGCGCC
GGCGTGCAGG TGACGGCCTA CACCCAGACC ATGAGCGACA TCGAGGCCAA GATCGGCTCC
CGCGCGAAGG CCGGTCAGAT CATCGGCAAC TTCAACAACC TGTTCATGCT GCGGGTGCGC
GAGACCGCCA CGGCCGAACT CCTTACCAAT CAGCTCCCCA AGGTCCAGAT CTACACCAGC
ACGCCGGCGA GCGGCGCCAA CGACGCGATC AACAACAACA AGAAGGTAGC CTTCACCTCC
AGCTCGCACG ACCAGGTGCA GATGACCAGC GTGCCGATGC TCGAGCCGGC CCACATCATT
GGTCTGCCCA AAGGACAAGC GTTCGCGCTA CTCGAGGGCG GCAATCTCTG GAAGATCCGA
ATGCCGCTGC CGGCGGTCGC CCCCGACGAG GTGATGCCGA AAAGCCTGCA GGAGCTGGCT
GCCGGTATGC GCAAGGGCCA GGCCGCCAAC AGCGAGTGGT GGGAGGCGCC GGGATACTCC
GCCCTGCAGG ATGGTCTGCC CCAGGACCTG GTCGACGATT TCCGTCACCT CGGCACCGGT
GAGGATGCCG CCTGA
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| Protein sequence | MAGQYPLEAL LRPAVELYTT TVCFTAAALC IVAPWTFSLT PLFGIVAALC FAWLGIVRLK
QAGVVLRYRR NIRRLPKYTM TSAEMPVSNE HLFIGKGFRW TQKHTQRLAD TYLPQFASYV
EPSPLYERAR RLEKQLEFAP FPLKLVAKAT AWDVAWNPAR PLPPVGGLPR LHGIEPREQD
VGLQLGERVG HTLVLGTTRV GKTRLAELFI TQDIRRTHCR VRRRRVKMGR RTQTVHHGYR
RRRAEEQPDY EVVIVFDPKG DADLLKRMYV ECERAGRLDE FYVFHLGHPD LSARYNAVGR
FGRISEVATR VAGQLSGEGN SAAFREFAWR FVNIIARALH ALGIRPDYQQ ILRHVVNIDA
LFVEYAQKYI SEHDPRAWDT IIQIEGKLND KNIPFNMKGR PLRVVAIDQY LTQKRIADPV
MEGLKSAVRY DKTYFDKIVA SLLPLLEKLT TGRISELLSP NYADLNDPRP IFDWMQVIRK
RAVVYVGLDA LSDTEVAAAV GNSMFSDLVS VAGHIYKHGV DDGLPGSLAS GKVRINLHAD
EFNELIGDEF IPMVNKAGGA GVQVTAYTQT MSDIEAKIGS RAKAGQIIGN FNNLFMLRVR
ETATAELLTN QLPKVQIYTS TPASGANDAI NNNKKVAFTS SSHDQVQMTS VPMLEPAHII
GLPKGQAFAL LEGGNLWKIR MPLPAVAPDE VMPKSLQELA AGMRKGQAAN SEWWEAPGYS
ALQDGLPQDL VDDFRHLGTG EDAA
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