Gene PA14_59550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_59550 
Symbol 
ID4384911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5299690 
End bp5300916 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content45% 
IMG OID639327393 
Producthypothetical protein 
Protein accessionYP_792945 
Protein GI116052630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000298681 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.1428700000000001e-18 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATTAT CTCTTATTCG TAGTCTCACT GCGTCCGCCT CACGAAACAT CTCGGCGTTG 
AAACGCGATG CCAAACGCTT GCAGAAGAAC TCCTTTCTTG TGTTTGGAAC AGAATATCCA
CTCAAGGTTT GCCAAAATGC GGTAGCAGTT TCTCGCGGCT TCCGCTCACT CGCTGATGTC
GATAAACTGG AGCAGCACAT TGGCATGAAT AGAAGCGCTC CATTCTGGGT GATCCGTGGC
CGCAACGATA CACACCAGGG GGTACTGGAA GCGCTATATT GTTTAGACCT TGAATATACC
GAGAATGGCC CCGTCGTTTT TACTGGAAAC CCAAAGCACT CTATACTTCC AGCCTTAGTC
CTTTTTCTTG AGCAAATGAG CTTTAAGAAA CTACCCGGAC TAATCCTCAT CGAAACAAAA
GAGACCTCAA TCCAAACAAC CCATATATTC GACGCAATAG AAAAATTAGA AGTCGAAGAA
ACTCTAAATA AATTTCGATT TCTTGACTTG CGAGACCGAA ACCTTCCCGT TTCGCTTAGT
ACCGAGGCTC GTTGCTGGAT CGAGTCAATT GTCAGTTTAT TGCCAAACGA CATCCAAGAG
GAAATACGTA ATAAAGGATG GTCAACTCAC TTAGAGATCA GTGCATATGA GCATGCAAAG
TCTCGTAATC AAGTATTTGG CTCCTCCAAC TTCCCTTGCG TCCCCTTCCT CTCCATAAAG
TCAGCGATCT ATCAACTCAT TTCAGGCGCA TACCCTCCCT TATGGATGCA GCCATCCTCC
TCTGGCGAAA TATCTAAAGT TGATATACGC CGACCTCCTC TCGAAAAAAG CTCAGAGGAA
ACCTTACTTT ATCTCATAAA AAAATTAGAG AATCGACAGT TCCACACAGG CATTTCATGT
GAGCATGAGA GTCGATGGCG GCCGTATGTC GTACTCTTCT CCAGGAATGA TCCGGCTAGC
GAGGTACTAG CAGGAGTTAT ACACTCGTAC TTTTCTTGGA AGCAAGATAG AGACCATCGC
TCACCCACCC TTTATGTTTC AGATGGAGCA GTTCCCTATG CTCCCAAGCT TCTAGGTTTA
GGCGGCCATA CGGTCATTGC AAATGGAATC ACTGAAATTC CCGACGGGGA TGGTCTTGGG
GAGTTCTATG GCTACAAGAA CTCACTTAAA GTCAGCTCCT TATCTAACGG AATACAGTTC
ATGGGTAAGC ATGTATCACT AAAGTAA
 
Protein sequence
MALSLIRSLT ASASRNISAL KRDAKRLQKN SFLVFGTEYP LKVCQNAVAV SRGFRSLADV 
DKLEQHIGMN RSAPFWVIRG RNDTHQGVLE ALYCLDLEYT ENGPVVFTGN PKHSILPALV
LFLEQMSFKK LPGLILIETK ETSIQTTHIF DAIEKLEVEE TLNKFRFLDL RDRNLPVSLS
TEARCWIESI VSLLPNDIQE EIRNKGWSTH LEISAYEHAK SRNQVFGSSN FPCVPFLSIK
SAIYQLISGA YPPLWMQPSS SGEISKVDIR RPPLEKSSEE TLLYLIKKLE NRQFHTGISC
EHESRWRPYV VLFSRNDPAS EVLAGVIHSY FSWKQDRDHR SPTLYVSDGA VPYAPKLLGL
GGHTVIANGI TEIPDGDGLG EFYGYKNSLK VSSLSNGIQF MGKHVSLK