| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59310 |
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| Symbol | pilR2 |
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| ID | 4382738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5283717 |
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| End bp | 5284796 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639327373 |
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| Product | type IV B pilus protein |
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| Protein accession | YP_792925 |
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| Protein GI | 116052610 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0474078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000000806613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGGGCT TCTGGGAGCA GTTGCAGTTC GCCTTCTACA GCAAGCAGTT CGGCCGCAAG
GAACGCCTGC AGTTCTACGA AAGCATGTCC ACCCTGCTCG AAAACGGGGT CCCGTTGAAG
GATGCTGTGG CAGAGGTGCA CAAGATCTTC GCTCATGAGG GGCAGCATCC GTTTCATCCG
GTGGCCATCG CCAGTCGCGA AGCGCTGATG GGGCTGTCCA ACGGCAAGCG TCTGGCCACC
GCCATGGCGC TCTATCTCCC CGCCCAGGAG CGAGCGTTGA TCGAGGCCGG CGAGATGAGC
GGCAACCTGG TTCAGGCCAT GGGCGATGCC GTCTCCCTGG TCGAGGCCCA GGCCAGGATC
CGCGCCACCA TCTGGCAGGC GCTGCTCTAC CCCTCGGCGC TGTCCGCCAT GATGGTGTTC
CTGCTGTGCA TCGTGGCCTA TCGCATGGTC CCCAGCCTGG CCAGGCTCTC CGACCCAGTC
ACCTGGACCG GCCCGCTCGC CACGCTCAAC GCCATTGCCA GCTTCGTCAC AGGACCTGGT
ATCTACGTTC TGGTCGCCGT CATCACCCTC ACGGTGGTGG TCATCGTCAC GTTGCCGACC
TACCGCTGGA AAGGCCGGGT CTGGCTGGAC CGGACGCTGC CGCCCTGGTC CATCTACCGC
ATGCTCCAGG GCACCACCTT CCTGCTGAAC ATGGCGGTCA TGCTCAACGC CGGCATACGC
CCCTACGACA GCCTGGCCAG CATGATCAAG ATCTCCCCGC CCTGGCTGAA GCAGCGCTTG
GAAGCTGCCC GCTACGGCGT GGGCCTGGGC CAGAACTTGG GTGTTGCCCT TCGCAGCGCC
GGTCACGATT TCCCCGACCG GCAGGCCATC CAGTACCTGT GCATCCTCGC CAACCGGGGA
GGCTTCTCCG AGGCGCTGGT CAAGTTCAGC CGCCGCTGGC AGGAGACCAG CCTCAAGCAG
ATCGAGCTGG CCGCCGGGCT GGTGAAGAAC TTCGCCCTGA TCTTCATCGG CGCGCTGATG
ATCCTGGTCC TGCTCGGCGC CTACCAGGCA CAGCAGCTCA TCCAATCCAT GAACCACTGA
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| Protein sequence | MGGFWEQLQF AFYSKQFGRK ERLQFYESMS TLLENGVPLK DAVAEVHKIF AHEGQHPFHP
VAIASREALM GLSNGKRLAT AMALYLPAQE RALIEAGEMS GNLVQAMGDA VSLVEAQARI
RATIWQALLY PSALSAMMVF LLCIVAYRMV PSLARLSDPV TWTGPLATLN AIASFVTGPG
IYVLVAVITL TVVVIVTLPT YRWKGRVWLD RTLPPWSIYR MLQGTTFLLN MAVMLNAGIR
PYDSLASMIK ISPPWLKQRL EAARYGVGLG QNLGVALRSA GHDFPDRQAI QYLCILANRG
GFSEALVKFS RRWQETSLKQ IELAAGLVKN FALIFIGALM ILVLLGAYQA QQLIQSMNH
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