| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_58750 |
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| Symbol | pilB |
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| ID | 4382648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5234279 |
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| End bp | 5235982 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639327321 |
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| Product | type 4 fimbrial biogenesis protein PilB |
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| Protein accession | YP_792873 |
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| Protein GI | 116052558 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.497058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CAATTCAACT CAGCGGCTTG GCTCGCCAGC TCGTCCTGCA TGAACTTCTC
GATGAAAAGG CCGCCCAACA GGCCCAATCG CAGGCCCAGC GCAACAAGTT GTCGCTGGTA
ACCTATCTGG TACAGAGCAA GCTAGTGAAA GGGCAGGCCT TGATCGAACT GGCTGCGGAT
CAATTCGGTA TCGCCTACTG CGACCTGAAC AGCCTTGAGC GGGACAGTCT GCCCAAGGAT
CTAATCAGCG AGAAGCTGGT GCGCCAGCAT CGAGTAGTTC CGTTGTGGCG ACGCGGCAAC
AAGCTGTTCG TCGGCATCTC CGATCCAGCC AACCACCAGG CGATTAACGA TGTGCAGTTC
AGCACAGGCC TGACTACTGA AGCCATCCTG GTCGAGGATG ACAAGCTCGG CATCATCATC
GAGAAACTAT TCGAAAATGC CACTGACAGC CTTGCAGGAC TGGACGACGT GGATCTGGAA
GGCCTGGATG TCGGCTCCGG TGCGGGCGCA AGCCAGGATG ATGATTCCAG TGCAGAGACA
GACGACGCCC CAGTGGTGCG TTTCGTCAAC AAAATGTTGT TGGATGCGAT CAGAGGCGGC
TCCTCCGACC TGCATTTCGA GCCCTATGAA AAGATTTACC GCGTACGTTT CCGTACCGAT
GGCATGCTCC ATGAAGTAGC CAAGCCGCCG ATCCAGTTGG CCAGCCGTAT TTCCGCGCGA
CTCAAGGTGA TGGCAGGCCT GGATATCTCC GAACGGCGCA AGCCGCAGGA CGGGCGGATC
AAGATGCGCG TGTCGAAGAC CAAGTCCATC GACTTCCGCG TCAACACCCT GCCGACCCTG
TGGGGCGAGA AGATCGTGAT GCGGATCCTC GACTCCTCTA GCGCGCAGAT GGGCATCGAC
GCCCTGGGCT ACGAGGAGGA CCAGAAGGAA CTCTACCTGG CTGCGCTCAA GCAGCCGCAG
GGCATGATCC TGGTCACCGG GCCCACCGGC TCGGGCAAGA CGGTCTCCCT GTACACCGGC
CTGAACATCC TCAACACCAC CGACATCAAC ATCTCCACTG CCGAAGACCC GGTGGAGATC
AACCTGGAAG GCATCAACCA GGTCAACGTC AATCCGCGCC AGGGCATGGA CTTCTCCCAG
GCGCTGCGCG CCTTCCTGCG CCAGGACCCG GACGTGATCA TGGTCGGCGA GATTCGCGAC
CTGGAGACGG CCGAGATCGC CATCAAGGCG GCGCAGACCG GGCATATGGT GATGTCCACC
CTGCACACCA ACAGCGCCGC CGAGACCCTG ACCCGCCTGC TGAACATGGG CGTGCCAGCG
TTCAACCTGG CGACCTCGGT GAATCTGATC ATCGCCCAGC GCCTTGCGCG AAAACTCTGC
TCGCACTGCA AGAAAGAACA CGAGGTGCCG AGGGAAACCC TGCTTCACGA GGGCTTCCCG
GAAGACAAGA TCGGCACCTT CAAGCTTTAT TCGCCGGTGG GCTGCGACCA TTGCAAGAAC
GGTTACAAGG GCCGTGTCGG TATTTATGAA GTGGTTAAAA ACACCCCGGC CCTGCAGCGG
ATTATCATGG AGGAAGGCAA CTCCATCGAG ATCGCCGAGC AAGCCCGCAA AGAAGGCTTC
AACGATCTGC GCACCTCAGG CCTGCTGAAA GCCATGCAGG GGATCACCAG CCTGGAGGAA
GTCAACCGCG TGACCAAGGA CTAA
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| Protein sequence | MNDTIQLSGL ARQLVLHELL DEKAAQQAQS QAQRNKLSLV TYLVQSKLVK GQALIELAAD
QFGIAYCDLN SLERDSLPKD LISEKLVRQH RVVPLWRRGN KLFVGISDPA NHQAINDVQF
STGLTTEAIL VEDDKLGIII EKLFENATDS LAGLDDVDLE GLDVGSGAGA SQDDDSSAET
DDAPVVRFVN KMLLDAIRGG SSDLHFEPYE KIYRVRFRTD GMLHEVAKPP IQLASRISAR
LKVMAGLDIS ERRKPQDGRI KMRVSKTKSI DFRVNTLPTL WGEKIVMRIL DSSSAQMGID
ALGYEEDQKE LYLAALKQPQ GMILVTGPTG SGKTVSLYTG LNILNTTDIN ISTAEDPVEI
NLEGINQVNV NPRQGMDFSQ ALRAFLRQDP DVIMVGEIRD LETAEIAIKA AQTGHMVMST
LHTNSAAETL TRLLNMGVPA FNLATSVNLI IAQRLARKLC SHCKKEHEVP RETLLHEGFP
EDKIGTFKLY SPVGCDHCKN GYKGRVGIYE VVKNTPALQR IIMEEGNSIE IAEQARKEGF
NDLRTSGLLK AMQGITSLEE VNRVTKD
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