| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_58730 |
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| Symbol | pilA |
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| ID | 4382646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5233511 |
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| End bp | 5234050 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639327319 |
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| Product | type IV pilin structural subunit |
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| Protein accession | YP_792871 |
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| Protein GI | 116052556 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.279942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.457351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCTC AGAAAGGCTT TACCTTGATC GAACTGATGA TCGTGGTTGC GATCATCGGT
ATTCTTGCTG CCGTCGCTTT GCCGGCATAT CAGGATTACA CCATTCGTGC TCGCGTGACA
GAGGGGGTTG GTCTGGCTGC CAGCGCCAAG ACGCTTATTG GCGATAGCTC TGCCACTGCC
GGTGAGCTAG CCGCTTCGGC AAGGGTCTGG AATGCTCAAG CCGGTAACGC CGGTGCTACC
AGTAAGTATG TGACCTCTGT GCGAATTGCA GAGGCGACTG GTGAAATCAC TGTTACTTTC
AATGCCACAA ACGTGGGTAA TATTCCGGCT GACTCTACCC TGGTATTTAC TCCCTATGTG
CAGAATGCTG CCGGTGCCCC GACTCAATTG GGTGCCAGTT ATGCTGCCGG TGTGACTGGC
TCTATTGACT GGGGTTGTGC ATCGGAATCC AATGCGGTTT CCAGTGGTCC CGACCGCAAT
ATGCCTGCCC TGACTGCAGG TACCCTGCCG GCTCGTTTCG CTCCGAGCGA ATGCCGCTAA
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| Protein sequence | MKAQKGFTLI ELMIVVAIIG ILAAVALPAY QDYTIRARVT EGVGLAASAK TLIGDSSATA
GELAASARVW NAQAGNAGAT SKYVTSVRIA EATGEITVTF NATNVGNIPA DSTLVFTPYV
QNAAGAPTQL GASYAAGVTG SIDWGCASES NAVSSGPDRN MPALTAGTLP ARFAPSECR
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