| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_58630 |
|---|
| Symbol | |
|---|
| ID | 4382639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5223821 |
|---|
| End bp | 5224984 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639327311 |
|---|
| Product | ornithine decarboxylase |
|---|
| Protein accession | YP_792864 |
|---|
| Protein GI | 116052549 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCA AGGTCGAGGA TTATTTCGCC CCTGAAACCT TCCAGCGCAT GAAGGCCTTC
GCCGACAAGC AGGAAACCCC CTTCGTGGTC ATCGACAAGC AAACCATCGC CGATGCCTAC
GACCAACTGA CCGACTGCTT CCCCTTCGCC AGGATCTACT ACGCGGTGAA GGCCAATCCC
GCTACCGAAA TCACCGAGCT GCTGCGCGAC AAGGGTTCGA ACTTCGATAT CGCCTCGATC
TACGAACTGG ACAAGGTGAT GAAGACCGGC GTCGGTCCGG AGCGCATCAG CTACGGCAAC
ACCATCAAGA AATCCAAGGA CATCCGCTAC TTCTACGAGA AGGGCGTGCG CTTGTTCGCC
ACCGACTCCG AAGCCGACCT GCGCAACATC GCCAAGGCCG CTCCCGGCGC CAAGGTCTAC
GTGCGTATCC TCACCGAGGG CTCGACTACC GCAGACTGGC CGTTGTCGCG CAAGTTCGGC
TGCCAGACCG ACATGGCCAT GGACCTGCTG ATCCTGGCCC GCCAGCTGGG CCTGGAGCCC
TACGGCATTT CCTTCCACGT CGGTTCGCAG CAGCGCGACA TCTCGGTGTG GGACGCGGCG
ATCGCTAAGG TCAAGGTGAT CTTCGAGCGC CTGAAGGAAG AAGACGGCAT CGTCCTGAAG
ATGATCAACA TGGGCGGCGG CTTCCCGGCC AACTACATCA CCAAGACCAA CGACCTGGAA
ACCTATGCGG AGGAGATCAT CCGCTTCCTC AAGGAGGACT TCGGCGACGA CCTGCCGGAA
ATCATCCTCG AGCCGGGCCG TTCGCTGATC GCCAATGCCG GCATCCTGGT CAGCGAAGTG
GTGCTGGTCG CCCGCAAGTC GCGGACCGCC GTGGAGCGCT GGGTCTATGC CGACGTCGGC
AAGTTCTCCG GACTGATCGA AACCATGGAC GAGTCGATCA AGTTCCCGAT CTGGACCGAG
AAGCAGGGCG AGATGGAAGA GGTGGTGATC GCCGGCCCGA CCTGCGACAG CGCCGACATC
ATGTACGAGC ACTACAAGTA TGGCCTCCCG CTGAACCTGG CGAGCGGCGA CCGCCTTTAC
TGGCTGTCTA CCGGCGCCTA CACCACCAGC TACAGTGCGG TGGAGTTCAA CGGCTTCCCG
CCGCTGAAGG CGTTCTACCT CTAG
|
|---|
| Protein sequence | MSIKVEDYFA PETFQRMKAF ADKQETPFVV IDKQTIADAY DQLTDCFPFA RIYYAVKANP
ATEITELLRD KGSNFDIASI YELDKVMKTG VGPERISYGN TIKKSKDIRY FYEKGVRLFA
TDSEADLRNI AKAAPGAKVY VRILTEGSTT ADWPLSRKFG CQTDMAMDLL ILARQLGLEP
YGISFHVGSQ QRDISVWDAA IAKVKVIFER LKEEDGIVLK MINMGGGFPA NYITKTNDLE
TYAEEIIRFL KEDFGDDLPE IILEPGRSLI ANAGILVSEV VLVARKSRTA VERWVYADVG
KFSGLIETMD ESIKFPIWTE KQGEMEEVVI AGPTCDSADI MYEHYKYGLP LNLASGDRLY
WLSTGAYTTS YSAVEFNGFP PLKAFYL
|
|---|
| |