| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_58470 |
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| Symbol | dppD |
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| ID | 4382626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5207642 |
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| End bp | 5208616 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639327297 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_792850 |
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| Protein GI | 116052536 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.868458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTCC TCGATATCAA GAACCTCAGC GTGCGCTTCG GCGACACCAC CGCCGTGCCC
GTGGTCGACG GCCTCGACCT GAGCGTCGAC AAGGGCGAGG TGCTGGCCAT CGTCGGCGAG
TCCGGCTCCG GCAAGTCGGT GACCATGATG GCCCTGATGG GCCTGATCGA CGCCCCCGGC
TGGGTGTCCG CCGATCACCT GCGCTTCGAC GGCCACGACA TGCTCACCCT CAAGGGCCGC
CAGCGCCGGC GCATCGTCGG CAAGGACATG GCGATGGTCT TCCAGGACCC GATGACCGCC
CTCAACCCCA GCTACACCGT CGGCTACCAG ATCGAGGAAG TCCTCCGCCT GCATCTCGGC
CTGCGCGGCA AGGCCCTGCG CCAGCGCGCC CTGGAACTGC TCGAACGGGT CGAGATCCCG
GCCGCCGCCA GCCGTCTCGA CGCCTACCCG CACCAGCTCT CCGGCGGCAT GAGCCAGCGC
GTGGCGATCG CCATGGCCAT CGCTGCCGAG CCCAAGCTGC TGATCGCCGA CGAGCCGACC
ACCGCCCTCG ACGTGACCAT CCAGGCGCAG ATCATGGAGC TGCTGCTGAA CCTGCAGCGC
GACCAGGACA TGGCGCTGAT CCTGATCACC CACGATCTCG CCGTGGTCGC CGAGACCGCC
CAGCGCGTCT GCGTGATGTA CGCCGGCGAA GCGGTGGAGA TCGGCGGCGT GCCGGCGCTG
TTCGACCGCC CGACCCATCC CTACACCGAG GCGCTGATCA AGGCGATCCC CGAGCACTGT
GCCGGCGAAG CCCGCCTGGC CACCCTGCCC GGCATCGTTC CGGGGCGCTA CGACCGCCCG
CGCGGTTGCC TGCTGTCGCC ACGCTGTCCC TATGCCCAGG AGCATTGCCG CCAGGAGCGG
CCGGCCCTGG AAGCGCACGA GCGCGGCGCG GTGCGCTGCT TCTATCCGTT GAACCTGCTG
AACGAGGTGG CCTGA
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| Protein sequence | MSLLDIKNLS VRFGDTTAVP VVDGLDLSVD KGEVLAIVGE SGSGKSVTMM ALMGLIDAPG
WVSADHLRFD GHDMLTLKGR QRRRIVGKDM AMVFQDPMTA LNPSYTVGYQ IEEVLRLHLG
LRGKALRQRA LELLERVEIP AAASRLDAYP HQLSGGMSQR VAIAMAIAAE PKLLIADEPT
TALDVTIQAQ IMELLLNLQR DQDMALILIT HDLAVVAETA QRVCVMYAGE AVEIGGVPAL
FDRPTHPYTE ALIKAIPEHC AGEARLATLP GIVPGRYDRP RGCLLSPRCP YAQEHCRQER
PALEAHERGA VRCFYPLNLL NEVA
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