Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_58450 |
Symbol | dppC |
ID | 4382625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5206678 |
End bp | 5207589 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639327296 |
Product | ABC transporter permease |
Protein accession | YP_792849 |
Protein GI | 116052535 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.982429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCA TGCACAACGC TCCCGCCAGC GACCCGAGCC TGGTCTACCC GTCCCCGCTG AAGGAATTCT GGCAGTCCTT CGCGCACAAC AAGGGCGCCC TCGGCGGCCT GCTGTTCATG CTGCTGATCG TGTTCTGCGC GCTGTTCGCC CCCTGGGTCG CCCCCTACGA TCCGAGCGAG CAGTTCCGCG ACTTCCTGCT GACCCCGCCA TCCTGGCTGG AAGGCGGCCA GGCGCGCTTC CTGCTCGGCA CCGACGAGCT GGGCCGCGAC CTGCTCTCGC GGCTGATCCA CGGCGCCCGC CTGTCGCTGC TGATCGGCCT GTCCTCGGTG GTGATCTCGC TGATCCCCGG CATCCTCCTC GGCCTGCTCG CCGGCTTCTC GCCGAACCGT GCCGGGCCGC TGATCATGCG CCTGATGGAC ATCATGCTGG CGCTGCCGTC GCTGCTGCTG GCGGTGGCCA TCGTGGCGAT CCTCGGCCCG GGCCTGATCA ACACCGTGAT CGCTATCGCC ATCGTCTCGC TGCCGGCCTA CGTACGCCTG ACCCGCGCCG CGGTGATGAC CGAGCTAAAC CGCGACTACG TCACCGCCTC GCGCCTGGCC GGCGCCGGCA CCCTGCGACT GATGTTCGTC TGCGTGCTGC CGAACTGCAT GGCGCCGCTG ATCGTCCAGG CCACCCTGAG CTTCTCTTCG GCGATCCTCG ACGCCGCCGC CCTCGGCTTC CTCGGCCTCG GCGTGCAACC GCCGACCCCC GAGTGGGGCA CCATGCTCGC CTCCGCCCGC GACTACATCG AGCGCGCCTG GTGGGTGGTC AGCCTGCCCG GCCTGACCAT CTTGCTCAGC GTACTGGCGA TCAACCTGAT GGGCGACGGC CTGCGCGACG CCCTCGATCC GAAACTGAAG AACGCGGCAT GA
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Protein sequence | MNAMHNAPAS DPSLVYPSPL KEFWQSFAHN KGALGGLLFM LLIVFCALFA PWVAPYDPSE QFRDFLLTPP SWLEGGQARF LLGTDELGRD LLSRLIHGAR LSLLIGLSSV VISLIPGILL GLLAGFSPNR AGPLIMRLMD IMLALPSLLL AVAIVAILGP GLINTVIAIA IVSLPAYVRL TRAAVMTELN RDYVTASRLA GAGTLRLMFV CVLPNCMAPL IVQATLSFSS AILDAAALGF LGLGVQPPTP EWGTMLASAR DYIERAWWVV SLPGLTILLS VLAINLMGDG LRDALDPKLK NAA
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