Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_58350 |
Symbol | |
ID | 4382618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5195069 |
End bp | 5196682 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639327288 |
Product | putative binding protein component of ABC transpor |
Protein accession | YP_792841 |
Protein GI | 116052528 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAGAA ACGCCGTCAT CCGCTCCGCG ATCATGCCCT CGCTGCTCGG CGCAGCGCTG GTCGCCGCCG TTCCCCAGGC CTTCGCCAGC AACCTGATCT TCTGCTCGGA AGGCAGCCCG GCCGGCTTCG ATCCCGCCCA GTACACCACC GGTACCGATT TCGACGCCGC GGCGGAAACC GTCTTCAACC GCCTGACCCA GTTCGAGCGC GGCGGCACCA AGGTCCTTCC CGGCCTCGCG GAAAGCTGGG ACGTCAGCGA CGACGGCAAG ACCTATACCT TCCACCTGCG CAAGGGCGTG AAGTTCCACA GCACCGACTA CTTCAAGCCG ACCCGCGAAT TCAATGCCGA CGACGTGCTG TTCACCTTCG AACGCATGCT CGACAAGGAT CATCCGTTCC GCAAGGCCTA CCCCACCGAG TTTCCCTACT TCACCGACAT GGGCCTGGAC AAGAACATCG CCAGGATCGA GAAGCTCGAC GAGCACACGG TGAAATTCAC CCTCAACGAG GTCGACGCGG CCTTCATCCA GAACCTGGCG ATGCCCTTCC CATCGATCCA GTCCGCCGAA TACGCCGCGC AACTGCTCAA GCAGGGCAAG GCCAGCGATA TCAACCAGAA GCCGATCGGT ACCGGCCCGT TCGTGTTCAG CCGCTACCAG AAGGATGCGC AGATCCGTTT CAAGGGCAAC AAGGACTACT GGAAGCCGGA CGAGGTGAAG GTCGACAACC TGATCTTCGC CATCAACACC GACGCCTCGG TGCGCGCGCA GAAGCTCAAG GCCGGCGAGT GCCAGATCAC CCTCAACCCA CGCCCCGCCG ACCTCGACGC GCTGAAGAAG GACCCGAACC TGAACCTGCC GTCGCAGGCC GGCTTCAACC TCGGCTACAT CGCCTACAAC GTCACCCACA AGCCGTTCGA CAAGCTGGAA GTACGCCAGG CGCTGGACAT GGCGGTGAAC AAGCAGGCCA TCATCGACGC CGTCTACCAG GGCGCCGGCC AGTTGGCGAG CAACGGCATG CCGCCGACCC AGTGGTCCTA CGACGAGACC ATCAAGGACG CGCCCTACGA TCCGGCCAAG GCCAGGGAGC TGCTGAAGAA GGCCGGGGTC GCCGAAGGCA CCGAGATCAC CCTGTGGGCC ATGCCGGTAC AACGCCCCTA CAACCCCAAC GCCAAGCTGA TGGCGGAAAT GCTGCAGAAC GATTGGGCGA AGATCGGTAT CAAGGCGAAG ATCGTCACCT ATGAATGGGG CGAATACATC AAGCGCGCCA AGGGCGGCGA GCATGACGCC ATGCTGATCG GCTGGAGCGG CGACAACGGT GACCCGGACA ACTGGCTCGG CACCCTCTAC GGCTGCGACG CGGTGGACGG CAACAACTTC TCCAAATGGT GCGACGCCGG CTACGACAAG CTGGTCAAGG ATGCCAAGCG CACCACCGAC CAGGGCAAGC GCACCGAGCT GTACAAGCAG GCCCAGCACA TCCTCAAGGA ACAGGTGCCG ATCACCCCGA TCGCCCACTC CACCGTGTAC CAGCCGATGC GCAAGACGGT ACACGACTTC AGGATCAGTC CCTTCGGCCT GAACTCGTTC TACGAGGTCA GCGTCGGCAA GTAG
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Protein sequence | MRRNAVIRSA IMPSLLGAAL VAAVPQAFAS NLIFCSEGSP AGFDPAQYTT GTDFDAAAET VFNRLTQFER GGTKVLPGLA ESWDVSDDGK TYTFHLRKGV KFHSTDYFKP TREFNADDVL FTFERMLDKD HPFRKAYPTE FPYFTDMGLD KNIARIEKLD EHTVKFTLNE VDAAFIQNLA MPFPSIQSAE YAAQLLKQGK ASDINQKPIG TGPFVFSRYQ KDAQIRFKGN KDYWKPDEVK VDNLIFAINT DASVRAQKLK AGECQITLNP RPADLDALKK DPNLNLPSQA GFNLGYIAYN VTHKPFDKLE VRQALDMAVN KQAIIDAVYQ GAGQLASNGM PPTQWSYDET IKDAPYDPAK ARELLKKAGV AEGTEITLWA MPVQRPYNPN AKLMAEMLQN DWAKIGIKAK IVTYEWGEYI KRAKGGEHDA MLIGWSGDNG DPDNWLGTLY GCDAVDGNNF SKWCDAGYDK LVKDAKRTTD QGKRTELYKQ AQHILKEQVP ITPIAHSTVY QPMRKTVHDF RISPFGLNSF YEVSVGK
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