Gene PA14_58350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_58350 
Symbol 
ID4382618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5195069 
End bp5196682 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content63% 
IMG OID639327288 
Productputative binding protein component of ABC transpor 
Protein accessionYP_792841 
Protein GI116052528 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAGAA ACGCCGTCAT CCGCTCCGCG ATCATGCCCT CGCTGCTCGG CGCAGCGCTG 
GTCGCCGCCG TTCCCCAGGC CTTCGCCAGC AACCTGATCT TCTGCTCGGA AGGCAGCCCG
GCCGGCTTCG ATCCCGCCCA GTACACCACC GGTACCGATT TCGACGCCGC GGCGGAAACC
GTCTTCAACC GCCTGACCCA GTTCGAGCGC GGCGGCACCA AGGTCCTTCC CGGCCTCGCG
GAAAGCTGGG ACGTCAGCGA CGACGGCAAG ACCTATACCT TCCACCTGCG CAAGGGCGTG
AAGTTCCACA GCACCGACTA CTTCAAGCCG ACCCGCGAAT TCAATGCCGA CGACGTGCTG
TTCACCTTCG AACGCATGCT CGACAAGGAT CATCCGTTCC GCAAGGCCTA CCCCACCGAG
TTTCCCTACT TCACCGACAT GGGCCTGGAC AAGAACATCG CCAGGATCGA GAAGCTCGAC
GAGCACACGG TGAAATTCAC CCTCAACGAG GTCGACGCGG CCTTCATCCA GAACCTGGCG
ATGCCCTTCC CATCGATCCA GTCCGCCGAA TACGCCGCGC AACTGCTCAA GCAGGGCAAG
GCCAGCGATA TCAACCAGAA GCCGATCGGT ACCGGCCCGT TCGTGTTCAG CCGCTACCAG
AAGGATGCGC AGATCCGTTT CAAGGGCAAC AAGGACTACT GGAAGCCGGA CGAGGTGAAG
GTCGACAACC TGATCTTCGC CATCAACACC GACGCCTCGG TGCGCGCGCA GAAGCTCAAG
GCCGGCGAGT GCCAGATCAC CCTCAACCCA CGCCCCGCCG ACCTCGACGC GCTGAAGAAG
GACCCGAACC TGAACCTGCC GTCGCAGGCC GGCTTCAACC TCGGCTACAT CGCCTACAAC
GTCACCCACA AGCCGTTCGA CAAGCTGGAA GTACGCCAGG CGCTGGACAT GGCGGTGAAC
AAGCAGGCCA TCATCGACGC CGTCTACCAG GGCGCCGGCC AGTTGGCGAG CAACGGCATG
CCGCCGACCC AGTGGTCCTA CGACGAGACC ATCAAGGACG CGCCCTACGA TCCGGCCAAG
GCCAGGGAGC TGCTGAAGAA GGCCGGGGTC GCCGAAGGCA CCGAGATCAC CCTGTGGGCC
ATGCCGGTAC AACGCCCCTA CAACCCCAAC GCCAAGCTGA TGGCGGAAAT GCTGCAGAAC
GATTGGGCGA AGATCGGTAT CAAGGCGAAG ATCGTCACCT ATGAATGGGG CGAATACATC
AAGCGCGCCA AGGGCGGCGA GCATGACGCC ATGCTGATCG GCTGGAGCGG CGACAACGGT
GACCCGGACA ACTGGCTCGG CACCCTCTAC GGCTGCGACG CGGTGGACGG CAACAACTTC
TCCAAATGGT GCGACGCCGG CTACGACAAG CTGGTCAAGG ATGCCAAGCG CACCACCGAC
CAGGGCAAGC GCACCGAGCT GTACAAGCAG GCCCAGCACA TCCTCAAGGA ACAGGTGCCG
ATCACCCCGA TCGCCCACTC CACCGTGTAC CAGCCGATGC GCAAGACGGT ACACGACTTC
AGGATCAGTC CCTTCGGCCT GAACTCGTTC TACGAGGTCA GCGTCGGCAA GTAG
 
Protein sequence
MRRNAVIRSA IMPSLLGAAL VAAVPQAFAS NLIFCSEGSP AGFDPAQYTT GTDFDAAAET 
VFNRLTQFER GGTKVLPGLA ESWDVSDDGK TYTFHLRKGV KFHSTDYFKP TREFNADDVL
FTFERMLDKD HPFRKAYPTE FPYFTDMGLD KNIARIEKLD EHTVKFTLNE VDAAFIQNLA
MPFPSIQSAE YAAQLLKQGK ASDINQKPIG TGPFVFSRYQ KDAQIRFKGN KDYWKPDEVK
VDNLIFAINT DASVRAQKLK AGECQITLNP RPADLDALKK DPNLNLPSQA GFNLGYIAYN
VTHKPFDKLE VRQALDMAVN KQAIIDAVYQ GAGQLASNGM PPTQWSYDET IKDAPYDPAK
ARELLKKAGV AEGTEITLWA MPVQRPYNPN AKLMAEMLQN DWAKIGIKAK IVTYEWGEYI
KRAKGGEHDA MLIGWSGDNG DPDNWLGTLY GCDAVDGNNF SKWCDAGYDK LVKDAKRTTD
QGKRTELYKQ AQHILKEQVP ITPIAHSTVY QPMRKTVHDF RISPFGLNSF YEVSVGK