Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_58030 |
Symbol | fumC |
ID | 4382592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5162131 |
End bp | 5163507 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327262 |
Product | fumarate hydratase |
Protein accession | YP_792815 |
Protein GI | 116052502 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.127723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA CCCGCATCGA ACGCGACAGC ATGGGCGAAC TGGCGGTCCC GGCGACCGCC CTCTATGGCG CCCAGACCCA GCGCGCGGTG AACAACTTCC CGGTCAGCGG CCAGCGCATG CCCCAGGCCT TCGTCCGCGC CCTGCTGCTG GCCAAGGCCG CGGCAGCGCG GGCGAACGTC TCCCTGCAGC AACTGGATGC ACCGATGGGC GAGGCGATCG CCGAGACCTG CCTGCAGTTG CTGCAGGAGG ACTTCATGCA GCATTTCCCG GTGGATGTGT TCCAGACCGG CTCCGGCACC AGTTCCAACA TGAACGCCAA CGAAGTGGTG GCGACCCTGG CCAGTCGCCG CCTGGGCGGC AAGGTCAATC CGAACGACCA TGTGAACTGC GGGCAGAGCA GCAACGACAT CATCCCCTCG ACCATCCACA TCAGTGCCGC CCTCGAGATC AGCGAACGCC TGCTGCCGGC GCTGCGCCAC CTGGAGCAGA CTATCCAGAG CAAGGCCGGC GAAGTGCATG CCTATGTGAA GACCGGCCGC ACCCACCTGA TGGATGCGAT GCCGGTACGC ATGAGCCAGG TGCTCGGTGG CTGGGCGCAG CAGGTGCGAC AGGCTGGCGT GCACATCGAG AGCGTACTTC CTGCCTTGCA GCAGTTGGCA CAGGGCGGCA CCGCGGTGGG CACCGGGATC AACGCCCATC CGCGGTTCGC CGAACGTTTC AGCCAGGAGC TGAACGACCT GACCGGGTTG GCGTTCCGCC CCGGCGACGA CTTCTTCGCC CTGATCGGTT CGCAGGACAC GGCGGTCGCT GCGTCCGGCC AGTTGAAGAC CCTGGCCGTG ACCCTGATGA AGCTGGCCAA CGACCTGCGC TGGATGAACT CCGGGCCGCT TGCCGGGCTC GGCGAGATCG AGCTGGAAGC GCTGCAACCA GGCTCCTCGA TCATGCCCGG CAAGGTCAAC CCGGTGATCC CGGAGGCCAC CGCGATGGTC GCCGCCCAGG TGATCGGCAA TGACGCCGCC ATTGCCGTCG CCGGCCAATC GGGCAACTTC GAACTGAACG TGATGCTGCC GCTGGTGGCG GACAACCTGT TGCACAGCAT CCAGTTGCTG GCCAACGTCA GCCGGCTGCT GGCGGACAAG GCCATCGCCA GCTTCAAGGT CAACCAGGGC AAGCTCAGCG AGGCGTTGGC GCGCAACCCG ATCCTGGTCA CTGCGCTGAA CCCGATCATC GGCTACCAGA AGGCTGCGGA AATCGCCAAG CAGGCCTATC GCGAGGGACG GCCGATCATC GATGTGGCGC TGGAAAACAC CGATCTGGAC CGTGCGCGCC TGGAGGTGTT GCTGGATCCG GAAAAACTCA CGGCTGGCGG CCTCTGA
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Protein sequence | MTDTRIERDS MGELAVPATA LYGAQTQRAV NNFPVSGQRM PQAFVRALLL AKAAAARANV SLQQLDAPMG EAIAETCLQL LQEDFMQHFP VDVFQTGSGT SSNMNANEVV ATLASRRLGG KVNPNDHVNC GQSSNDIIPS TIHISAALEI SERLLPALRH LEQTIQSKAG EVHAYVKTGR THLMDAMPVR MSQVLGGWAQ QVRQAGVHIE SVLPALQQLA QGGTAVGTGI NAHPRFAERF SQELNDLTGL AFRPGDDFFA LIGSQDTAVA ASGQLKTLAV TLMKLANDLR WMNSGPLAGL GEIELEALQP GSSIMPGKVN PVIPEATAMV AAQVIGNDAA IAVAGQSGNF ELNVMLPLVA DNLLHSIQLL ANVSRLLADK AIASFKVNQG KLSEALARNP ILVTALNPII GYQKAAEIAK QAYREGRPII DVALENTDLD RARLEVLLDP EKLTAGGL
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