Gene PA14_57900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_57900 
Symbol 
ID4383007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5153876 
End bp5154415 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID639327250 
Producthypothetical protein 
Protein accessionYP_792803 
Protein GI116052490 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CCCATTCGGC CGCGGAACTC CCGGTCCGGG CCCGCCGGAT ACGCCTGGCG 
ATCTTCGACG TCGACGGCGT GCTGACCGAC GGCAAGCTGT ATTTCCTCGT CGACGGCAGC
GAGTTCAAGA CCTTCAACAC CCTGGACGGA CATGGCATCA AGATGCTCAT CGCCTCCGGC
GTGCGCACCG CCATCATCAC CGGCCGCGAC ACTCCGGTGG TCGAACGGCG CGCGCGCAAC
CTGGGCATCC AGCACCTCTA TCAGGGCCGG GAAGACAAGC TCGCCGTCCT CGACGAACTT
CTCGGCGAAC TCGGACTAGG CTATGAGCAA GTCGCCTACC TTGGCGACGA CCTGCCCGAT
CTGCCGGTGA TCCGCCGCGT CGGCCTGGGC ATGGCGGTAG CCAGTGCCGA CCCGTTCGTG
CGCCAGCATG CCCATGGCGT CACCGCGGCC CGCGGCGGCG AAGGCGCCGC CCGCGAGTTC
TGCGAACTGA TCATGCGCGC CCAGGGTACG CTCGAAGCCG CCCAGGGCGC CTATCTGTAG
 
Protein sequence
MSDTHSAAEL PVRARRIRLA IFDVDGVLTD GKLYFLVDGS EFKTFNTLDG HGIKMLIASG 
VRTAIITGRD TPVVERRARN LGIQHLYQGR EDKLAVLDEL LGELGLGYEQ VAYLGDDLPD
LPVIRRVGLG MAVASADPFV RQHAHGVTAA RGGEGAAREF CELIMRAQGT LEAAQGAYL