| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_57260 |
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| Symbol | lpxC |
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| ID | 4382511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5101834 |
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| End bp | 5102745 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639327199 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_792752 |
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| Protein GI | 116052441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000255636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAAC AACGCACCTT GAAGAACATC ATCCGGGCTA CTGGCGTCGG TCTGCACTCG
GGGGAAAAGG TTTACCTGAC CCTGAAACCG GCGCCGATGG ACACCGGTAT CGTGTTCTGC
CGCACCGACC TGGATCCGGT AGTGGAAATC CCGGCCCGGG CCGAGAACGT CGGCGAAACC
ACCATGTCGA CCACCCTGGT CAAGGGTGAC GTCAAAGTGG ATACGGTGGA GCACCTGCTC
TCGGCCATGG CCGGCCTGGG TATCGACAAC GCCTACGTCG AGCTGTCCGC TTCGGAAGTG
CCGATCATGG ATGGCAGCGC TGGTCCGTTC GTATTCCTGA TCCAGTCCGC CGGATTGCAA
GAGCAGGAAG CTGCCAAGAA GTTCATCCGC ATCAAGCGCG AAGTCAGCGT GGAAGAGGGC
GACAAGCGCG CCGTCTTCGT TCCGTTCGAC GGCTTCAAGG TCAGCTTCGA GATCGATTTC
GATCATCCGG TCTTCCGTGG TCGCACCCAG CAGGCCTCGG TCGATTTCTC CAGTACTTCC
TTCGTCAAGG AGGTCAGCCG CGCCCGTACC TTCGGGTTCA TGCGCGACAT CGAGTACCTG
CGTTCGCAGA ACCTGGCACT CGGCGGTAGC GTGGAGAACG CGATCGTGGT CGACGAGAAC
CGCGTGCTCA ACGAAGACGG CCTGCGTTAC GAGGACGAGT TCGTCAAGCA CAAGATCCTG
GATGCCATCG GCGACCTGTA TCTGCTCGGC AACAGTCTTA TCGGCGAGTT CCGTGGCTTC
AAGTCCGGCC ATGCCCTGAA CAACCAACTG CTGCGTACGT TGATCGCAGA CAAGGATGCT
TGGGAAGTGG TGACCTTCGA AGACGCGCGT ACCGCGCCTA TTTCCTATAT GCGCCCGGCG
GCGGCAGTGT AG
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| Protein sequence | MIKQRTLKNI IRATGVGLHS GEKVYLTLKP APMDTGIVFC RTDLDPVVEI PARAENVGET
TMSTTLVKGD VKVDTVEHLL SAMAGLGIDN AYVELSASEV PIMDGSAGPF VFLIQSAGLQ
EQEAAKKFIR IKREVSVEEG DKRAVFVPFD GFKVSFEIDF DHPVFRGRTQ QASVDFSSTS
FVKEVSRART FGFMRDIEYL RSQNLALGGS VENAIVVDEN RVLNEDGLRY EDEFVKHKIL
DAIGDLYLLG NSLIGEFRGF KSGHALNNQL LRTLIADKDA WEVVTFEDAR TAPISYMRPA
AAV
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