| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_57220 |
|---|
| Symbol | secA |
|---|
| ID | 4382508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5097424 |
|---|
| End bp | 5100174 |
|---|
| Gene Length | 2751 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639327196 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_792749 |
|---|
| Protein GI | 116052438 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCGC CTTTGTTGAA GAAACTCTTT GGAAGCAAGA ACGAGCGTGA TGTAAAGCGC
ATGGCCAAGG CTGTACAGGC CATCAATGCG CTCGAGCCCC AGATGGTGGC GCTCTCCGAC
GAGCAGTTGA AGGCGAAAAC GGCTGAATTC CAGCAGCGCT ACGCCAAGGG CGAAACGCTC
GACCAATTGC TGCCCGAAGC CTTCGCCGTG GTTCGCGAGG CTGGCAAGCG GGTGATGGGC
ATGCGCCACT TCGACGTCCA GCTGATCGGC GGCATGACCC TGCACGACGG CAAGATCGCC
GAAATGCGTA CCGGCGAGGG CAAGACCCTG GTGGGCACCC TGCCGGTCTA CCTCAACGCG
CTGTCCGGCA AGGGCGTGCA CGTGGTCACG GTGAACGACT ACCTGGCGCG CCGCGACGCC
AACTGGATGC GCCCGCTGTA CGAGTTCCTC GGCCTCAGCG TCGGCGTGGT CACTCCCTTC
CAGCCGCCGG AAGACAAGCG CGCCGCCTAC GCCGCCGATA TCACCTACGG CACCAACAAC
GAATTCGGCT TCGATTACCT GCGCGACAAC ATGGCCTTCA GCCTGGACGA CAAGTTCCAG
CGCGAGCTGA ACTTCGCCGT GGTCGACGAA GTGGACTCGA TCCTCATCGA CGAGGCGCGT
ACCCCGCTGA TCATCTCCGG CCAGGCCGAA GACAGCTCCG AGCTGTACAT CAAGATCAAC
AAGCTGATCC CGCGTCTCAA TCGCCAGGTC GAAGAGGTCG AGGGCAAGCC GACCGAGGAA
GGCCACTACA GCATCGACGA GAAGACCCGC CAGGTCGAAC TCAACGAGCA GGGCCACCAG
TTCATCGAGG ACCTGCTGAG CCAGAACGGC CTGCTCGGCG AAGGCGAGAG CCTCTATTCG
GCGCACAACC TGAGCCTGCT GACCCACGTC TACGCAGCGC TGCGCGCGCA CACCCTGTTC
CACCGCAACG TCGAGTACAT CGTCCAGGGC GACCAGATCC TCCTGATCGA CGAGCACACC
GGCCGCACCA TGCCTGGCCG TCGCCTGTCC GAGGGCCTGC ACCAGGCCAT CGAGGCGAAG
GAGGGCCTGC CGATCCAGGC CGAGAGCCAG ACCCTGGCCT CCACCACCTT CCAGAACTAT
TTCCGCCTGT ACAACAAGCT GGCCGGCATG ACCGGCACCG CCGATACCGA GGCCTTCGAG
TTCCGCCAGA TCTACGGTCT CGACGTGGTG GTGATCCCGA CCCACCGGCC GATCGCGCGC
AAGGACTTCA ACGACCTGGT CTACCTGACC CAGGAAGAGA AGTACGCGGC GATCATCACC
GACATCAAGC AGTGCCAGGC CCTCGGCCGG CCGATCCTGG TCGGCACCGC GTCGATCGAG
AGTTCCGAGT ACGTTTCCAA GCTGTTGCAA GAGGCAGGCA TCGAGCACAA GGTGCTCAAC
GCCAAGTACC ATGAGAAGGA AGCCGAGATC ATCGCCCAGG CTGGCGCGCC CGGTTCGGTG
ACCATCGCCA CCAACATGGC CGGCCGCGGT ACCGACATCC TCCTCGGTGG CAACTGGGAA
GTCGAAGTCG CGGCCCTGGA GAACCCCACC GAGGAGCAGA TCGCCCAGAT CAAGGCCGAA
TGGCAGAAGC GCCACCAGCA GGTGATCGAG GCGGGTGGCC TGCACGTGAT CGCCTCCGAG
CGCCACGAAT CCCGCCGGAT CGACAACCAG TTGCGCGGCC GTGCCGGTCG TCAGGGCGAC
CCGGGTTCCA GCCGCTTCTA CCTGTCGCTG GAAGACAACC TGATGCGGAT CTTCGCCTCC
GACCGGGTGA AGAACTTCAT GAAGGCGCTG GGCATGCAGT CCGGCGAGGC GATCGAGCAC
CGCATGGTGA CCAACGCCAT CGAGAAGGCC CAGCGCAAGG TCGAAGGGCG CAACTTCGAC
ATCCGCAAGC AACTGCTGGA ATTCGATGAC GTAGCCAACG AGCAGCGCAA GGTGATCTAC
CACATGCGCA ACACCCTGCT GTCGGCAGAG GACGTGGGCG AGACCATCAA GGAGTTCCGC
GAGGAAACCC TCAGCGCCAC CATCAACCAA CACATTCCGC CGCAGTCGCT GCCCGAGCAG
TGGGACATCG AAGGCCTGGA GGCCGCGCTG TACAGCGACT TCGCCGTGCG CCTGCCGATC
CAGCAGTGGC TGGACGAAGA CGACAAGCTG TACGAGGAAA CCCTGCGTAG CAAGATCCTC
GAGCAGATCG TCGCCGCCTA CTACGAGAAG GAAGAGCTGG CCGGCGCCGA AGCCCTGCGC
GCCTTCGAGA AGCAGATGCT GCTGCGGGTA CTGGACGACC TGTGGAAGGA CCACCTGTCG
ACCATGGACC ACCTGCGGCA CGGCATCCAC CTGCGTGGCT ACGCGCAGAA GAATCCGAAG
CAGGAATACA AGCGCGAGTC CTTCACCCTG TTCCAGGAGT TGCTGGACTC GATCAAGCGC
GACACCATCC GCGTGCTGTC CCACGTCCAG GTCCGTCGCG AAGACCCGGC CGAAGAGGAG
GCCCGCCTGC GTCGCGAGGC GGAGGAACTG GCCAAGCGCA TGCAGTTCCA GCACGCCGAG
GCTCCCTCGA TGGAGCAGGC CGTGGCCGGC GAGGAAGAAG AGCTTCCCGA GGGCCCGGCT
CCGGTCGTGC CGCTCGAGCC TGTGCGCAAC GAGCAGAAGA TCGGCCGCAA CGAGCCTTGC
CCGTGCGGTT CCGGCAAGAA ATACAAGCAC TGCCACGGGC AGCTGGACTA A
|
|---|
| Protein sequence | MFAPLLKKLF GSKNERDVKR MAKAVQAINA LEPQMVALSD EQLKAKTAEF QQRYAKGETL
DQLLPEAFAV VREAGKRVMG MRHFDVQLIG GMTLHDGKIA EMRTGEGKTL VGTLPVYLNA
LSGKGVHVVT VNDYLARRDA NWMRPLYEFL GLSVGVVTPF QPPEDKRAAY AADITYGTNN
EFGFDYLRDN MAFSLDDKFQ RELNFAVVDE VDSILIDEAR TPLIISGQAE DSSELYIKIN
KLIPRLNRQV EEVEGKPTEE GHYSIDEKTR QVELNEQGHQ FIEDLLSQNG LLGEGESLYS
AHNLSLLTHV YAALRAHTLF HRNVEYIVQG DQILLIDEHT GRTMPGRRLS EGLHQAIEAK
EGLPIQAESQ TLASTTFQNY FRLYNKLAGM TGTADTEAFE FRQIYGLDVV VIPTHRPIAR
KDFNDLVYLT QEEKYAAIIT DIKQCQALGR PILVGTASIE SSEYVSKLLQ EAGIEHKVLN
AKYHEKEAEI IAQAGAPGSV TIATNMAGRG TDILLGGNWE VEVAALENPT EEQIAQIKAE
WQKRHQQVIE AGGLHVIASE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL EDNLMRIFAS
DRVKNFMKAL GMQSGEAIEH RMVTNAIEKA QRKVEGRNFD IRKQLLEFDD VANEQRKVIY
HMRNTLLSAE DVGETIKEFR EETLSATINQ HIPPQSLPEQ WDIEGLEAAL YSDFAVRLPI
QQWLDEDDKL YEETLRSKIL EQIVAAYYEK EELAGAEALR AFEKQMLLRV LDDLWKDHLS
TMDHLRHGIH LRGYAQKNPK QEYKRESFTL FQELLDSIKR DTIRVLSHVQ VRREDPAEEE
ARLRREAEEL AKRMQFQHAE APSMEQAVAG EEEELPEGPA PVVPLEPVRN EQKIGRNEPC
PCGSGKKYKH CHGQLD
|
|---|
| |