Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_57140 |
Symbol | |
ID | 4382501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5089455 |
End bp | 5090555 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327189 |
Product | putative two-component response regulator |
Protein accession | YP_792742 |
Protein GI | 116052431 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCG GTGTGGCGGA GACCGACGAT TTCTTCCCGA TGGCGCGCGC GACCGCGGCC GGGACCCGGC CTCCCGCGAC GAACCGGGCC CTTGCCGGCA GCGTACCGGC GCCCATCCTC TTCTCGAGTC CGTTCATGCC CAACCCCGAT CTCAGCATCC TGGTCGTCGA CGACGCCAAG TTTTCCAGCG CCATGATCGG CCGCGCCCTC AGCCAGGCCG GCTACCAGGA CATCCGCTTC GCCAGCAGCG CCAGCGAGGC CCTGCAGCAG CTCGAACAAC GCCCGGTCAG CGTGCTCCTG GCCGACTGGC TGATGCCGGA GATGGACGGC CTGGAACTGA CCGCCCGGGT CCGCCAACTG GACGAAAGCA TCAACCACTA CACCTATATC GTCCTGCTCA CCGGCAAGGA AGGCGAGAAC GTCCTCGGCG AGGCCTTCGA CCGCGGCGTC GACGACTTCG TCAGCAAGGC CGCGATGAAC GAGCAACTGG TGCCGCGCAT CTACGCAGCC GACCGCCTGT GCAACACCCT GCAACGGTTG CTGGTGGAAA ACCGCCTGCT CACCGAAAAC ATCGCGCGGA TGGAAGAACG CAACCTGGTG GATACCCTCA CCGGCCTCGG CAATCCCCGC TACCTGCGCC AGAAGCTGGC CGACAGCCTG CGCCAGGTGG AAACCCGCGG TGGAGCGCTG TGCTACCTGC TGGTCGGCAT GCCCGAGGCA CCGGTCCTGC GCCAGCGGCA CGGCGAGGCC TTCCATCGCG AGCTGCTGCT CGGCGTGGCC AGGCGCCTGC AACAGCTGGT CCGGCCGCTG GACGTGCTGG TGCGCCTGGA CGAGCAGCAT TTCGCCCTGA TCACCTTGGT GGAGGACCTG CACGAATGCT CGTCGAGCAG CTTCAAGCGG CTGCACGACG GGCTCAACCT GAAGGCCTTC AAGACCAGCG AAGGCTTCAT CAGCCTGAAA GCCGGCATCG CCATGCTCGG CCTCGACAGC GGGGCATTGC CGCTGGGCAT CGACGAACTG CTGCAGCGCA CCGAGGCCCT GTTGCCCGAT GCCTATGCCA GCGGCAGGAT CGCAACCTGC CGGCTACCGG CACTGCGCTA G
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Protein sequence | MPAGVAETDD FFPMARATAA GTRPPATNRA LAGSVPAPIL FSSPFMPNPD LSILVVDDAK FSSAMIGRAL SQAGYQDIRF ASSASEALQQ LEQRPVSVLL ADWLMPEMDG LELTARVRQL DESINHYTYI VLLTGKEGEN VLGEAFDRGV DDFVSKAAMN EQLVPRIYAA DRLCNTLQRL LVENRLLTEN IARMEERNLV DTLTGLGNPR YLRQKLADSL RQVETRGGAL CYLLVGMPEA PVLRQRHGEA FHRELLLGVA RRLQQLVRPL DVLVRLDEQH FALITLVEDL HECSSSSFKR LHDGLNLKAF KTSEGFISLK AGIAMLGLDS GALPLGIDEL LQRTEALLPD AYASGRIATC RLPALR
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