| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_57100 |
|---|
| Symbol | |
|---|
| ID | 4382498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5085962 |
|---|
| End bp | 5087746 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639327186 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_792739 |
|---|
| Protein GI | 116052428 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00901] AmpG-related permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC AATCCTGGCG AGAGGCTCTG GTCGCCTACA AGTCTCCCGC CAGCCTGGCC
CTCCTGCTGC TCGGCTTCGC CGCCGGCCTG CCGACCATGC TGGTGTTCAA CACCCTGTCG
GTGTGGCTGC GCGAAGCCGG CGTGGCGCGG GATACCATCG GTTTCGCCAG TTGGCTGGGG
CTGGTGTACG CCTTCAAGTG GGTCTGGTCG CCGATGCTCG ACCAGTGGCG CCTGCCCTTC
GTCGGCCGTC TCGGCCGGCG CCGTTCCTGG CTGGTGTTCT CGCAGGTGCT GATCGCCCTG
GGACTGCTCG GCATGGCCCT GTGCAATCCG CAGAGCCACC TGCCCTGGCT GATCGGCCTG
GCCCTGCTGG TGGCGTTCGC CTCCGCCACC CAGGACATCG CGATCGACGC CTACCGCCTG
GAAATCGCCG AGGATAGCCG CCAGGCCGCC CTCGCTGCCT GCTACATGAC CGGCTACCGC
GCGGCGATCC TGCTGGCCAG CGCCGGCGCG CTGATTCTCG CCGAATGGTT CGGCTCCACC
AGCCTCAACT ACAGCCAATC GGCCTGGGGC CTGACCTATG CGTTGTTCGC CCTGCTGATC
CTGCCTGGGC TGGTCACCAG CCTGCTGATC CGCGAGCCGG CGGTGGACGT GCCGATCCAC
GTCAACCCGT CGCGTTTCGA CTTCAACCAC CAACTGCTCT CGGTGCTCCT GCTGCTGATC
CTGCTGATCT CGCTGCCGGC GATGATCACC GCCCTCCTCG ACCGCGCCTG GCCGCGCGCC
GGCCTCTACG CGCTGCTCAT GGGGATCTGC CTGTCGCCGT GGGGACGCCA GCAGATCCGC
CCGGTCCGCG AACTGCTCGC CACCGTGCGC AGGCCGCTGC TGGTGGCGGC GCGCGGCAAG
GAAGTGCCGC TGTTCGATTT CGTCCACCAG GCGGTCTCGG TGATGGTGCT GATCATCCTC
CTCGTCACCG TCACCGCCAT GTGCCGCGCC TACTACTCCG GTGCCTGGCC GCGCGGCACG
CTGTTCCTGC TGATCGCCGC GTCCTGCCTG TCGGCACCCG GGCGCCTGCT GATGGCCCCG
GTGCTGACGC CGATCACCGA GTTCGTCCAG CGTTATCGCT GGCAGGCCCT GCTGCTGCTC
GGCCTGATCT CCACCTATCG CCTGTCGGAC ACGGTGATGG GGGTGATGGC CGGGGTCTTC
TACATCGACA TGGGCTTCTC CAAGGAAGTC ATCGCCAGTG TCAGCAAGGT CTTCGGCGTA
CTCATGACCC TGATCGGCGC CGCCGCCGGC GGGGTGCTGA TCGCCCGCTT CAGCATCCTC
TCCATCCTGT TCATCGGCGG TGCCGCTTCG GCTGCCACCA ACCTGCTGTT CGCCATGCTC
GCCCAGCTCG GCCCGCTGCA CGCCGAGGCC CTGCCCAGCC ATGACGTGAT CAGCCTGGTG
ATGGCGCTCG AGCCGCACGT GCTGATGCTG GTGATGACCA TCACCCTCGA CAACTTCAGC
GGCGGCCTCG CCGCCTCGGC CTTCGTCGCC TACCTGTCGA GCCTGACCAA CCTGAAGTTC
TCCGCCACCC AGTACGCCAT GCTCAGCTCG ACCATGCTCC TGCTGCCGCG CTTCATCGGC
GGCTACTCCG GAACCATGGT CGAGAGCCTC GGCTACGAGC ACTTCTTCTA CGTCACCGCG
GTGATGGGCA TTCCCACCCT GCTGCTGATC GGCTGGTTGT GGCTGCGCCG CGCGCCGTCC
AGCGAGACGC CGGCGCCGGG TCACCAGAAC GCCGAGCAGC ACTGA
|
|---|
| Protein sequence | MTQQSWREAL VAYKSPASLA LLLLGFAAGL PTMLVFNTLS VWLREAGVAR DTIGFASWLG
LVYAFKWVWS PMLDQWRLPF VGRLGRRRSW LVFSQVLIAL GLLGMALCNP QSHLPWLIGL
ALLVAFASAT QDIAIDAYRL EIAEDSRQAA LAACYMTGYR AAILLASAGA LILAEWFGST
SLNYSQSAWG LTYALFALLI LPGLVTSLLI REPAVDVPIH VNPSRFDFNH QLLSVLLLLI
LLISLPAMIT ALLDRAWPRA GLYALLMGIC LSPWGRQQIR PVRELLATVR RPLLVAARGK
EVPLFDFVHQ AVSVMVLIIL LVTVTAMCRA YYSGAWPRGT LFLLIAASCL SAPGRLLMAP
VLTPITEFVQ RYRWQALLLL GLISTYRLSD TVMGVMAGVF YIDMGFSKEV IASVSKVFGV
LMTLIGAAAG GVLIARFSIL SILFIGGAAS AATNLLFAML AQLGPLHAEA LPSHDVISLV
MALEPHVLML VMTITLDNFS GGLAASAFVA YLSSLTNLKF SATQYAMLSS TMLLLPRFIG
GYSGTMVESL GYEHFFYVTA VMGIPTLLLI GWLWLRRAPS SETPAPGHQN AEQH
|
|---|
| |