Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_56880 |
Symbol | |
ID | 4382478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5067018 |
End bp | 5068148 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327166 |
Product | putative membrane fusion protein |
Protein accession | YP_792719 |
Protein GI | 116052408 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTCC GCCGCATGTT GATCATGCTC GCCGCGGTGA TCGCCGTGGT GGCGATTCTC GCCGGCTACA AGGTCTACTC CATCCGTCAG CAGATCGCCC TTTTCAGCGC ACCGAAACCG CCGATCAGCG TGACCGCCAG CCTGGCCGAA AAGCGTCCCT GGCAGAGCCG CCTGCCAGCC ATCGGCAGCC TCAAGGCATT CCAGGGCGTG ACCCTCACCG CCGAAGTCTC CGGCACGGTA CGCGACGTAC TGTTCCTTTC CGGCGACCAG GTGAAGCTGG ACCAACCGCT GATCCAGCTG GAAAGCGACG TCGAGGAAGC CACCCTGCGC ACTGCCGAGG CCGATCTCGG CCTGGCCAGG GCCGAGTACC AGCGCGGCCG CGAACTGATC GGCAGCAAGG CCATCTCGAA AAGCGAATTC GACCGTCTCG CCGCGCAGTG GGCCAAGACC AGCGCCACCG TCGCCGAGCT GAAGGCGGCG CTGGCGAAGA AGCGCGTGCT CGCGCCCTTC GCCGGGACCA TCGGCATCCG CCAGGTGGAC GTCGGCGACT ACGTCTCGCC CGGGACGCCG ATCGCCACCT TGCAGGACCT TTCCACCCTG CTCCTGGATT TCCACCTGCC CGAGCAGGAC TTCCCCCTGC TCAGCCGCGG CCAGTTGGTG AAGGTCCGGG TCGCCGCCTA CCCCGGCCAG GTGTTCGACG CCGAGATCGC CGCCATCAAC CCCAAGGTCG ACAACGAGAC CCGCAACCTG CAGGTCCGCG CCGCCCTGGA GAACCCGGAC GGCAAGCTGC TGCCGGGCAT GTTCGCCAAC CTCGAGGTGA TGTTGCCTGG CGAGGAACAA CGCGTCGTGG TGCCGGAGAC GGCGATCACC TTCACCCTCT ACGGCGACTC GATCTACGTC GTCGGGCAGA AGAAGGACGA GCAGGGCCAG GTGTCGAAGG ATGACAAGGG CCAGCCGCAA CGGGTCGTCG AGCGCCGCTT CGTCAGGATC GGCGAACGCC GCGAAGGCCT GGCGGTGGTG CTCGAAGGCC TGGAGGGCGG CGAGCAGGTA GTGACTTCCG GGCAACTGAA GCTCGACAAC GGCGCCGCGG TGGCCATCGT CGCCGAGCGG GACCTCCAGC AAGAGCACTG A
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Protein sequence | MLLRRMLIML AAVIAVVAIL AGYKVYSIRQ QIALFSAPKP PISVTASLAE KRPWQSRLPA IGSLKAFQGV TLTAEVSGTV RDVLFLSGDQ VKLDQPLIQL ESDVEEATLR TAEADLGLAR AEYQRGRELI GSKAISKSEF DRLAAQWAKT SATVAELKAA LAKKRVLAPF AGTIGIRQVD VGDYVSPGTP IATLQDLSTL LLDFHLPEQD FPLLSRGQLV KVRVAAYPGQ VFDAEIAAIN PKVDNETRNL QVRAALENPD GKLLPGMFAN LEVMLPGEEQ RVVVPETAIT FTLYGDSIYV VGQKKDEQGQ VSKDDKGQPQ RVVERRFVRI GERREGLAVV LEGLEGGEQV VTSGQLKLDN GAAVAIVAER DLQQEH
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