| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_56780 |
|---|
| Symbol | sodB |
|---|
| ID | 4382470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5057249 |
|---|
| End bp | 5057830 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639327158 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_792711 |
|---|
| Protein GI | 116052400 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 82 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCG AATTGCCGCC GCTGCCTTAC GAAAAGAACG CCCTTGAGCC GCACATTTCC
GCAGAAACCC TGGAATACCA CCACGACAAG CACCACAACA CCTACGTGGT GAACCTGAAC
AACCTGATCC CGGGTACCGA GTTCGAAGGC AAGAGCCTCG AAGAGATCGT CAAGAGCTCC
TCCGGCGGCA TCTTCAACAA CGCCGCCCAG GTGTGGAACC ACACCTTCTA CTGGAACTGC
CTGAGCCCGA ACGGCGGTGG CCAGCCCACC GGCGCCCTGG CCGACGCCAT CAACGCCGCC
TTCGGCTCCT TCGACAAGTT CAAGGAAGAG TTCACCAAGA CTTCCGTCGG CACCTTCGGT
TCCGGCTGGG GCTGGCTGGT GAAGAAGGCC GACGGCTCCC TGGCCCTGGC CAGCACCATC
GGTGCCGGCA ACCCGCTGAC CAGCGGCGAC ACCCCGCTGC TGACCTGCGA CGTCTGGGAA
CACGCCTACT ACATCGACTA CCGCAACCTG CGTCCGAAGT ACGTCGAGGC GTTCTGGAAC
CTGGTCAACT GGGACTTCGT AGCGAAGAAT TTCGCTGCCT GA
|
|---|
| Protein sequence | MAFELPPLPY EKNALEPHIS AETLEYHHDK HHNTYVVNLN NLIPGTEFEG KSLEEIVKSS
SGGIFNNAAQ VWNHTFYWNC LSPNGGGQPT GALADAINAA FGSFDKFKEE FTKTSVGTFG
SGWGWLVKKA DGSLALASTI GAGNPLTSGD TPLLTCDVWE HAYYIDYRNL RPKYVEAFWN
LVNWDFVAKN FAA
|
|---|
| |