Gene PA14_56480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_56480 
Symbol 
ID4382429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5036820 
End bp5038040 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID639327136 
Productputative hydrolase 
Protein accessionYP_792689 
Protein GI116052378 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAC ATCGACACAT CGTGGCCTGG CTCGAGGAGG TCGCCGACGA CCTGCGTAGC 
CTGCGCCAGG ACATCCACGC CCATCCCGAA CTGGGCTTCG AGGAGCGACG CACCGCCGCG
CTGGTCGCCG AGTGCCTGCG CGGCTGGGGC TACGAAGTGC ACGAAGGGAT CGGCCGCACC
GGCGTGGTCG GCGTCCTCCG CCAGGGCGAC GGTACGCGGC GGCTCGGCCT GCGGGCGGAC
ATGGATGCGC TGCCGATCGT CGAGGCCACG GGGCTCGGCT ACAGCAGCTG CCACGGCGGG
CGCATGCACG CCTGCGGCCA CGACGGACAC ACCGCGATGC TGCTCGGCGC GGCACGCTAC
CTGGCGGCGA CGCGGCGTTT CGACGGCACC CTGGTACTGA TTTTCCAGCC CGCCGAGGAA
GGCCAGGGCG GCGCCGAGGC GATGCTCGCC GACGGGCTGC TGGAGCGCTT TCCCTGCGAT
GCGCTGTTCG GCATGCACAA CATGCCGGGA CTGGAGGCCG GGCACCTGGG CTTCCGCGCG
GGACCGATGA TGGCTTCCCA GGACCTGCTG AGCGTCACCC TGGAGGGCGT CGGTGGCCAC
GGTTCGATGC CGCACTTGAG CGTCGATCCG CTGCTCGCCG CGTCGAGCGC GGTGATGGCC
CTGCAGAGCG TGGTGGCGCG CAACGTCGAT CCGCAGAAGG CCGCGGTGGT CACGGTCGGT
GCATTGCAGG CCGGCGAGGC GGCCAACGTC ATACCCCAGC GCGCCGTGCT GCGCCTGAGC
CTGCGGGCGC TCGACGGCCA GGTGCGCGAG CAGGTGCTGC AGCGGGTTCG CCAGATCATC
GAGTTGCAGG CCGCCAGCTA TGGGTGCCAG GCCAGCATCG AGCACTACCC GGCCTATCCG
GTGCTGGTCA ACAGCGTCGA GGAAACCGAG TTCGCCCGCC AGGTCGGGGT CGAGCTGGCC
GGCGCGGAGC AGGTCGACGG CGCCACGCCG AAGCTGATGG GCAGCGAGGA CTTCGCCTGG
ATGCTACAGC GCTGCCCCGG CAGCTACCTG TTCATCGGCA ACGGCAGAGG ACGGCCGATG
GTGCACAACC CGGCCTATGA CTTCAACGAC GACATCCTGG TCCGGGGCGC GGCCTATTGG
GGCGCGCTCG CCGAGACCTG GCTGGCCGCC CCCGCGGCGT CCGGCCTTCG ACTGACTGCC
GCCAATAACG GCGCGGCCTG A
 
Protein sequence
MARHRHIVAW LEEVADDLRS LRQDIHAHPE LGFEERRTAA LVAECLRGWG YEVHEGIGRT 
GVVGVLRQGD GTRRLGLRAD MDALPIVEAT GLGYSSCHGG RMHACGHDGH TAMLLGAARY
LAATRRFDGT LVLIFQPAEE GQGGAEAMLA DGLLERFPCD ALFGMHNMPG LEAGHLGFRA
GPMMASQDLL SVTLEGVGGH GSMPHLSVDP LLAASSAVMA LQSVVARNVD PQKAAVVTVG
ALQAGEAANV IPQRAVLRLS LRALDGQVRE QVLQRVRQII ELQAASYGCQ ASIEHYPAYP
VLVNSVEETE FARQVGVELA GAEQVDGATP KLMGSEDFAW MLQRCPGSYL FIGNGRGRPM
VHNPAYDFND DILVRGAAYW GALAETWLAA PAASGLRLTA ANNGAA