| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55980 |
|---|
| Symbol | |
|---|
| ID | 4382587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4996812 |
|---|
| End bp | 4998302 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639327100 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792653 |
|---|
| Protein GI | 116052342 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0734375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAG CGAATGAGTT GTTGATCGGC GCTGGCCCCG ATGGCCAGCC GGTAGGGCAG
GCCTGGCGCC TGGCCAACCG TCATGGATTG ATCGCCGGCG CCACCGGTAC CGGCAAGACG
GTGACCTTGC AGCACCTCGC CGAATCCTTC AGCGATGCCG GTGTCGCGGT GTTCGCCGCC
GACATCAAGG GCGACCTGTG CGGCATCGCC GCGCCGGGCA ACCCGCAGGG CAAGGTCGCC
GAACGCATCG CCAGCATGCC GTGGCTGAAC TACCAGCCGA AGGCCTACCC GACCACGCTC
TGGGACATCG CCGGGAAGAC CGGCCACCCG TTGCGCACCA CCATCAGCGA GATGGGCCCG
CTGCTGCTGG CCAACCTCCT GGAGTTGACC GATAGCCAGC AGGCCGCGCT GTTCGCCGCC
TTCCAGGTGG CCGACCGGGA AGGCCTGCTG CTGCTCGACC TGAAGGACCT GAAGGCGCTG
CTCAACCACC TGAAGGACAA TCCGGAGATC CTCGGCAAGG ACCGGGCGCT GTTCACCGGC
GCTTCCGGGC AGGCGCTGCT GCGCCGCCTG GCCACTCTGG AGCAGCAGGG CGCCGAGGCC
TTCTTCGGCG AGCCTGCCCT GCAACTGGAA GACATCCTCC GCCCCGAGCC GGACGGGCGG
GGGCGCATCC ACCTGCTCGA CGCCAGCCGC CTGGTGCACG AGGCGCCGAA GGTCTACGCG
ACTTTCCTGC TCTGGCTGCT GGCCGAGCTG TTCGAGCAAC TGCCGGAGCG CGGCGATGCC
GACAAGCCGG TGCTGGCACT GTTCTTCGAC GAGGCCCACC TGCTGTTCAA CGGCACGCCG
AAAGCCTTGC GCGACCGCCT GGAACAGGTG GTCCGGCTGA TCCGCTCGAA AGGCGTCGGG
GTGTACTTCG TCACCCAGTC GCCGGGCGAC CTGCCGGACG ATGTCCTGGC CCAGCTCGGC
CTGCGTATCC AGCATGGCCT GCGCGCCTTC ACCGCCAAGG AACAGAAATC GCTGCGCGCG
GTGGCCGACG GTTTCCGCCC GAACCCGGCG TTCGACACCC TGGGGGTGCT GACCGAACTG
GGTATCGGCG AGGCGCTGGT CGGCACCCTG GAGGAAAAGG GCACGCCGGC CATGGTCCAG
CGCGTCGCGG TGGCGCCGCC CTATTCGCGG ATCGGCCCGC TGAGCGACAG CGAACGCGCC
GAACTGGTCC AGCGGTCGCC GTTGAAGGGG CGCTACGACC AGCCGATCGA TCGCGAGTCG
GCCTACGAGG TGCTGGCGAG CAAGGCGGAC GCCAAGCCCG AGGTGCAGGG CCAGGCGCCT
GCACAGCAGG AAAGCGCGTC CGGCGTCGGC GGCATGGCCG GGCAGATTCT CGGCAGCCTG
CTGTCCAATT CGACGGTGAA GAGCGCCATG CGCCAGGCGG CCAACCAGTT GAGCCGGGAG
CTGGTGCGTG GCCTGCTCGG CTCGTTGATG GGCGGGAAGA AGCGGCGCTG A
|
|---|
| Protein sequence | MSQANELLIG AGPDGQPVGQ AWRLANRHGL IAGATGTGKT VTLQHLAESF SDAGVAVFAA
DIKGDLCGIA APGNPQGKVA ERIASMPWLN YQPKAYPTTL WDIAGKTGHP LRTTISEMGP
LLLANLLELT DSQQAALFAA FQVADREGLL LLDLKDLKAL LNHLKDNPEI LGKDRALFTG
ASGQALLRRL ATLEQQGAEA FFGEPALQLE DILRPEPDGR GRIHLLDASR LVHEAPKVYA
TFLLWLLAEL FEQLPERGDA DKPVLALFFD EAHLLFNGTP KALRDRLEQV VRLIRSKGVG
VYFVTQSPGD LPDDVLAQLG LRIQHGLRAF TAKEQKSLRA VADGFRPNPA FDTLGVLTEL
GIGEALVGTL EEKGTPAMVQ RVAVAPPYSR IGPLSDSERA ELVQRSPLKG RYDQPIDRES
AYEVLASKAD AKPEVQGQAP AQQESASGVG GMAGQILGSL LSNSTVKSAM RQAANQLSRE
LVRGLLGSLM GGKKRR
|
|---|
| |