Gene PA14_55900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55900 
Symbol 
ID4382582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4990630 
End bp4991814 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID639327095 
Producthypothetical protein 
Protein accessionYP_792648 
Protein GI116052337 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA ACTTCGTGGC GCTGACCCAG CATCCCGGCG AACTCGACTG GTTGCAGAAC 
AGCCTGGCGT CCGCCGGCCA GGTGGTACCG GCAGGCAGCG CCAGCCTGGA GGAGCTGCTG
GCGCTGCTCG ACGTCACCGC CGCCGGGGTG CTGTTCATCA GCCTCGGCAA GAGCAACCTG
GTGTCCCAGG GCGCGCTGGT CGAGGGATTG GTATCGGCGC GACCGATGCT CTCGGTGGTG
GCCATCGGCG ACGGCCTGGA CAACCAGTTG GTGCTGGCGG CGATGCGCGC CGGCGCGCGC
GACTTCATCA CCTACGGCGC CCGCACCAGC GAGCTGACCG GGCTGATCCG GCGCCTCGGC
GGACGCCTGC CCAGCGTGCC GGTGAGCGCG GCGCGCCAGG GCGAGCTGCT GACCCTGGTC
AGCGCCCGAC CGGACGCCGA CGGCGCCTTC GTCGCCTTGC ACCTGGCCAA GGCGTTGCAG
GAGCAGACGC CGAACCAGGT CCTGCTGCTG GACGTCGGCC AGCCCACCGG CGAGGCGCTG
GCGATCCTCG GCCTGGACTC GGCCTTCACC TTCAGCGACG CCTTGCGCAA CCTGCGGCGC
CTCGACCAGA CCCTGATCGA CAGCGCCTTC ACCCGCCTCG ACAGCGGCCT GCGGATACTC
AGCCTGACCG ACGAGCCCGG CGTGCTGGAG CGAGTCACCA CCGCCGAACT CTATCTGTTG
CTGGGCAACC TGCGCGGGGC GTTCAGCCAT GTGGTGGTCA ACCTCACCGG GCTGCCCGAG
GGCGAGCTGA GCAACCAGTT GCTGGTGCAG GCCAACCGCG TGCTGTGGAT GGTCGACCAG
AGCGTGCCGT CCTGCAAGAA GGGTCTGGAG CGCCTGCGCC GCCTGCGCGA GCGCAACCTG
CCGTTGCCCT CCATCGAGTT GCTGATCGAG CGCTACCTGC CCAATGTGGC GCCGGACCAG
CAGGCCCTCA GCCGGATGTT CGACCTCGAT CTGTTCGGCG TCCTGCCGTT GTCCCCGGAA
TCGCGCCTGC GCGCGAAGAA CCTCGGCAAG AGCCTGTTCG AGGTGGCGCC GCGCGACCCA
TTGGCGGCCA AGCTGCGGCA ACTGGCGGAC AGCCTGTGCG TGACACGCGG CGAGCGCCGT
TCGCTGCTGT CCTGGCTCGG CCGGGCCAAG GCGGCGCTGC TATGA
 
Protein sequence
MNQNFVALTQ HPGELDWLQN SLASAGQVVP AGSASLEELL ALLDVTAAGV LFISLGKSNL 
VSQGALVEGL VSARPMLSVV AIGDGLDNQL VLAAMRAGAR DFITYGARTS ELTGLIRRLG
GRLPSVPVSA ARQGELLTLV SARPDADGAF VALHLAKALQ EQTPNQVLLL DVGQPTGEAL
AILGLDSAFT FSDALRNLRR LDQTLIDSAF TRLDSGLRIL SLTDEPGVLE RVTTAELYLL
LGNLRGAFSH VVVNLTGLPE GELSNQLLVQ ANRVLWMVDQ SVPSCKKGLE RLRRLRERNL
PLPSIELLIE RYLPNVAPDQ QALSRMFDLD LFGVLPLSPE SRLRAKNLGK SLFEVAPRDP
LAAKLRQLAD SLCVTRGERR SLLSWLGRAK AALL