| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55890 |
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| Symbol | |
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| ID | 4382581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4989368 |
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| End bp | 4990633 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639327094 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_792647 |
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| Protein GI | 116052336 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG GATTCGGCGC GCGTCCTGAC GGCGGTGCCT TCCACTACCG CCAGGAGCAG
GACATCCAGG CGCTGAAGCT GCGCCTGCAC CGCTACATCA TCGACGAGAT CGACGAAGAC
GGCATGAACC TGCTGGAGGG CGCGCGCTCC GCCGTGGTCC AGTACGTCTC GGAAAAGGTC
TGCGAATACG GCTCGCGCCA TCAACTGGCG ATCTCCCGCT ACGAACTGGA CCGCCTGGCC
GAAGAGGTGG TCGACGAACT CACCGGCTTC GGCCCGCTGG AGATCCTCCT GCGCGATCCC
GGCGTCTCGG AAATCCTCGT CAACGGACCG GGCCGGGTGT TCGTCGAGCG GGAAGGGCGG
CTCTACCAGA GCGACCTGCG CTTCATCGAC GACCACCATG TGCTGCGGGT GATCCAGCGT
ATCCTCGCGC CCCTCGGCCG ACGCCTGGAC GAGTCCAGCC CGATGGTCGA CGCGCGCCTG
CCGGACGGCA GCCGGGTCAA CGCGATCATT CCCCCGGTGG CGCTGGACGG GCCGTGCATC
TCGATCCGCA AGTTCAGCCA GGAGCTGCTG CGCAGTGCCG ACCTGCTGGC CTACCAGAGC
GTCGACGAAG CCTTGCTCGA GTTCCTCCGC CAGGCGGTCT CGCGCCGCTG CAACATCCTC
ATCAGTGGCG GCACCGGCAC CGGCAAGACC ACCTTGCTCA ACGTCATCAG CGGCTTCATC
GACGAACGCG AGCGGATCGT CACCATCGAG GACACCGCCG AGCTGCAACT CGGCCACGAC
CACGTGGTGC GCCTGGAGAC CCGTCCGCCG AACGCCGAGG GCTACGGCGA GGTGACCGCC
CGCGACCTGA TCCGCAACGC CCTGCGGATG CGCCCGGACC GGATCATCCT CGGCGAGATC
CGCGGCGTCG AGGTGCTCGA CGTGCTGCAG GCGATGAACA CCGGCCACGA CGGCTCGATG
AGCACGGTGC ACGCCAACTC GGCGATGGAT TCGCTGCTGC GCATGGAGAT GCTGGTCGGC
CTGACCGGCA ACAGGCTGCC GGAGCAGACC TTGCGCCTGA TGATCTGCGC CGCGCTGGAC
GTGGTGGTGC AGATCACCCG CCTGGCCAGC GGTCGGCGTT GCATCAGCGA AGTGCTGGAG
GTGCTGGAGG TGCGCGACGG CGTGTACGTC ACCAATACCC TGTTCAGTCT CGACCGGCGC
GGTAGCGGGC AGTTCGTCCG CCAGGCCGCG CCGGTCGGGC AGAAATTCCG CCAGGCGCTG
CTGTGA
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| Protein sequence | MSTGFGARPD GGAFHYRQEQ DIQALKLRLH RYIIDEIDED GMNLLEGARS AVVQYVSEKV
CEYGSRHQLA ISRYELDRLA EEVVDELTGF GPLEILLRDP GVSEILVNGP GRVFVEREGR
LYQSDLRFID DHHVLRVIQR ILAPLGRRLD ESSPMVDARL PDGSRVNAII PPVALDGPCI
SIRKFSQELL RSADLLAYQS VDEALLEFLR QAVSRRCNIL ISGGTGTGKT TLLNVISGFI
DERERIVTIE DTAELQLGHD HVVRLETRPP NAEGYGEVTA RDLIRNALRM RPDRIILGEI
RGVEVLDVLQ AMNTGHDGSM STVHANSAMD SLLRMEMLVG LTGNRLPEQT LRLMICAALD
VVVQITRLAS GRRCISEVLE VLEVRDGVYV TNTLFSLDRR GSGQFVRQAA PVGQKFRQAL
L
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