Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55860 |
Symbol | |
ID | 4382579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4987566 |
End bp | 4988477 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327092 |
Product | hypothetical protein |
Protein accession | YP_792645 |
Protein GI | 116052334 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAC AGTGGCTGAT TTTCGCGGCG CTCCTGATGG CGGTCGGCGG TGCCTTGTTG CTGTTGCTCC AGGCGCGCAA CGGCAGCCGC GAGCAGCGCC TGATCGAGAG GCGCCTGGGA GCGCTGGCCA ACCCTGGCGG CTCGACCAGG TGGCTGGCCG GCATGACCGA GCGGATGGAC GACAGCTTCT GGGTGCGGCG CCTGCAACTG ATGGACAGCG AGGCCCGCCA GTTGCTGCAA CAGGCCGGCT GGCACGAGAG TCGCTACCGG ACCCTGTACC TGATCTCGGT GTTCCTCACG CCGCTGCTGT TCGTTCTCCT GGTCTTGCTG GTCAAGCTGC TGCGCGCCGA GAGCGAGGCG TCCTACGCGG TGCCGCTGCT GTTCGCCGCC GGCATCGGTT TCCTCCTGCC CAAGCAGGTG CTCAAGCACT TCGCCAAGGC GCGCCGGGCG CTGATCGCCG ACGAGATGAT CCTGTTCGTG CAACTGATCC GCATCCTCTT CGATGCCGGC CTGACCGTGG AGCAGACGCT GCGCGTGGTC TGCCTGGAAG GCCGCGGGAT CACCCCGCAA CTGGCCCGCG AGCTGGACCT GGCGCTGACC CGTGCCGACA ACGGCATCGA CCTGGCGGAA GAGCTGGAGG CGCTTGCCCG GCGCCTGCAG GTGGACCCGC TGAACGACTG CTGCGGCGTG CTACGGCAGA TGTTGCGCCA GGGCGGCAGT GCGCGCAGCA CCCTGCTGAC GCTCAAGCAA CTGTTCGAAG ACCGGCGCCT GACCACCTTG CAGGAACGCA TCGGCAAGCT GTCGGCGAAG ATGAGCCTGG TGATGATGGT ACTGCTGTTC CCGGCGCTGC TGATCGTCCT CGCCGGTCCG GGCGTCATCG CCATTACCAA GGCCTTGGGA GGACTGGGAT GA
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Protein sequence | MQAQWLIFAA LLMAVGGALL LLLQARNGSR EQRLIERRLG ALANPGGSTR WLAGMTERMD DSFWVRRLQL MDSEARQLLQ QAGWHESRYR TLYLISVFLT PLLFVLLVLL VKLLRAESEA SYAVPLLFAA GIGFLLPKQV LKHFAKARRA LIADEMILFV QLIRILFDAG LTVEQTLRVV CLEGRGITPQ LARELDLALT RADNGIDLAE ELEALARRLQ VDPLNDCCGV LRQMLRQGGS ARSTLLTLKQ LFEDRRLTTL QERIGKLSAK MSLVMMVLLF PALLIVLAGP GVIAITKALG GLG
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