Gene PA14_55860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55860 
Symbol 
ID4382579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4987566 
End bp4988477 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID639327092 
Producthypothetical protein 
Protein accessionYP_792645 
Protein GI116052334 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAC AGTGGCTGAT TTTCGCGGCG CTCCTGATGG CGGTCGGCGG TGCCTTGTTG 
CTGTTGCTCC AGGCGCGCAA CGGCAGCCGC GAGCAGCGCC TGATCGAGAG GCGCCTGGGA
GCGCTGGCCA ACCCTGGCGG CTCGACCAGG TGGCTGGCCG GCATGACCGA GCGGATGGAC
GACAGCTTCT GGGTGCGGCG CCTGCAACTG ATGGACAGCG AGGCCCGCCA GTTGCTGCAA
CAGGCCGGCT GGCACGAGAG TCGCTACCGG ACCCTGTACC TGATCTCGGT GTTCCTCACG
CCGCTGCTGT TCGTTCTCCT GGTCTTGCTG GTCAAGCTGC TGCGCGCCGA GAGCGAGGCG
TCCTACGCGG TGCCGCTGCT GTTCGCCGCC GGCATCGGTT TCCTCCTGCC CAAGCAGGTG
CTCAAGCACT TCGCCAAGGC GCGCCGGGCG CTGATCGCCG ACGAGATGAT CCTGTTCGTG
CAACTGATCC GCATCCTCTT CGATGCCGGC CTGACCGTGG AGCAGACGCT GCGCGTGGTC
TGCCTGGAAG GCCGCGGGAT CACCCCGCAA CTGGCCCGCG AGCTGGACCT GGCGCTGACC
CGTGCCGACA ACGGCATCGA CCTGGCGGAA GAGCTGGAGG CGCTTGCCCG GCGCCTGCAG
GTGGACCCGC TGAACGACTG CTGCGGCGTG CTACGGCAGA TGTTGCGCCA GGGCGGCAGT
GCGCGCAGCA CCCTGCTGAC GCTCAAGCAA CTGTTCGAAG ACCGGCGCCT GACCACCTTG
CAGGAACGCA TCGGCAAGCT GTCGGCGAAG ATGAGCCTGG TGATGATGGT ACTGCTGTTC
CCGGCGCTGC TGATCGTCCT CGCCGGTCCG GGCGTCATCG CCATTACCAA GGCCTTGGGA
GGACTGGGAT GA
 
Protein sequence
MQAQWLIFAA LLMAVGGALL LLLQARNGSR EQRLIERRLG ALANPGGSTR WLAGMTERMD 
DSFWVRRLQL MDSEARQLLQ QAGWHESRYR TLYLISVFLT PLLFVLLVLL VKLLRAESEA
SYAVPLLFAA GIGFLLPKQV LKHFAKARRA LIADEMILFV QLIRILFDAG LTVEQTLRVV
CLEGRGITPQ LARELDLALT RADNGIDLAE ELEALARRLQ VDPLNDCCGV LRQMLRQGGS
ARSTLLTLKQ LFEDRRLTTL QERIGKLSAK MSLVMMVLLF PALLIVLAGP GVIAITKALG
GLG