Gene PA14_55800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55800 
Symbol 
ID4382574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4983374 
End bp4983856 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content51% 
IMG OID639327087 
Producthypothetical protein 
Protein accessionYP_792640 
Protein GI116052329 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAT TAGCACTGGC CTTGTGGGCA AGCGTTTGCG GATATCAGGA CATCAAACGT 
TTGCGCGTCT CCAACTGGCT TATCCTGGGC GGATTTCTTA TTTCCTTTGT TTATTTATAT
GTGAAAGAGT CAAGCCTGAC CGGTGCTACG GTTAATATGG CAATGACCGC ACTTTTTATA
GGCGTCTGCC TCAGCCTTCC CGGCTACCTT CTCGGCAGGC TCGGCGCTGC CGACGTCAAG
TACCTGGCCG CACTGGGGCT GGCCAGCGAC CCACTTACGG TGCTCTATAG CCTGGCCTTC
GGCTGCCTGC TGTGCATCGC GCTATTCATC CTCGTAAAGT TATTCAAACG TTCGGTAGAA
AAGTCCGCAA TGAATGAAGA AGTTCGCCTT CGAAGGGCAC CGTCAAAAAA CAAGTCATTC
CCTTTTATAT TCGCCATGAG CGCCGGCCTT TTGGCACATC TGATTATCAG TAAAATTATC
TGA
 
Protein sequence
MEQLALALWA SVCGYQDIKR LRVSNWLILG GFLISFVYLY VKESSLTGAT VNMAMTALFI 
GVCLSLPGYL LGRLGAADVK YLAALGLASD PLTVLYSLAF GCLLCIALFI LVKLFKRSVE
KSAMNEEVRL RRAPSKNKSF PFIFAMSAGL LAHLIISKII