Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55690 |
Symbol | recC |
ID | 4384618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4968641 |
End bp | 4972156 |
Gene Length | 3516 bp |
Protein Length | 1171 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327077 |
Product | exodeoxyribonuclease V gamma chain |
Protein accession | YP_792630 |
Protein GI | 116052319 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGAAC CCTTGGGAAC CACCGCCCTC ACGCCCGGAT TCATGATCGT CCACGGCAAT CGCCTGGACG ACCTGCGCGA CCTCGCCGTT TCCTGGATGC GCCGCTATCC GCTGGCGCCG CTGGAAAGCG AGCGGGTCCT GGTGCACAGC AACGGCATCG CCCAATGGTT GAAGCTGGCA TTGGCCGAAG ATCCCCGCGA GGACGGTGGC GGCGGTGGCG GCATCGCCGC GGCGCTGGAG GTGCAGTTGC CGGCGCAGTT CCTCTGGCAG GCCTATCGCG CGGTGCTGGG CCGCGAAAGC ATTCCCGAGG TTTCCGAACT GGACAAGGCG CCGCTGACCT GGCGCCTGAT GCGTCTGCTT CCCGGATTGC TGGAGCGTCC CGAGTTCCGC ACCCTGCAAC GTTTCCTCGC CGACGATGCC GACCTGCGCA AGCGTCATCA ACTGGCCGAG CGCCTGGCCG ACCTGTTCGA CCAGTACCAG GTCTATCGCG GCGACTGGCT CGACGACTGG AGCCAGGGCC GCGACCAGTT GCGCACGGCG AACGGGCAGG CGCGCCCGCT CGGTGCCGAC GAGCGCTGGC AGGCCGAATT GTGGCGCGCG CTGCTCGCCG ACGTCGGTGC CGATAGCCTG GCCCGCAGCC GCTCCGGCGT GCACCGGCGC TTCATCGAGG CGCTGCGCTT CGCCAGCGCG GCGCCGCGCG CGTTGCCGCG ACGAGTAGTG GTGTTCGGGA TTTCCTCGAT GCCGGCGCAG ACCCTCGAGG CGCTGGCCGC CCTGGCCAGG TTCAGCCAGG TGCTGCTCTG CGTGCACAAC CCCTGTCGCC ACCACTGGGC CGACATCGTC GCCGACAAGG ACCTGTTGCG CCACGAGTAC CGCCGCCAGC AGCGCCGCGC CGGCGTCCCC GCCGACCTCG ACGAGGACCG CCAGCACCAG CATGCCCAGC CGTTGCTGGC GGCCTGGGGC AAGCAGGGCC GCGACTACAT CAACCTGCTC GACAGCTACG ACGACCCGGA CAGCTATCGG AACCTGTTCG GCGAGGTCAA CGGCGGGCGC ATCGACCTGT TCAGCGAGGA GGCCCCGCAC GGGCTGCTCG GCCAGTTGCA GGACGATATC CTCGAACTGC GCCCGTTGGC GGAAACCCGC GAGCACTGGC CGCCGGTGGC GCCGCGGAGC GACGCCTCGA TCCGCTTCCA TGTGGCCCAC AGCGCGCAGC GCGAAGTGGA GATCCTCCAC GACCAGTTGC TCGCCCGCTT CAACGCCGAT CCGAGCCTGA AGCCGCGCGA CGTGATCGTC ATGGTCCCCG ACATCAACGC CTACGCGCCG CACATCGAGG CGGTGTTCGG CCAGGTGCCG CGCGACGACC AGCGCTTCAT TCCCTATACC CTGGCCGACC AGGGACAGCG CGGTCGCGAG CCGCTGCTGA TCGCCCTGGA GCACCTGCTG AAACTGCCCG ACAGCCGTTT CGCCGTGAGC GAGATCCTCG ACCTGCTGGA CGTCCCGGCA TTGCGCCGGC GTTTCGGCGT CGACGAGGCC GACCTGGCGA CCCTGCACCG CTGGATCGAA GGCGCCGGCG TGCGCTGGGG GCTGGATGCC GCGCAGCGCG AGCGTCTCGG CCTGCCAGCG GGGCTGGAGG GCAACAGTTG GCGCTTCGGT CTGCGGCGCA TGCTGCTCGG CTACGCGGTC GGCGAAGGTG CGGCCCTGCA AGGCATCCAG CCCTACGATG AGGTCGGTGG CCTGGACGCC GCCCTCGCAG GCCCGCTGGC TGTGCTGCTG GAGCGCCTCG AGGTGGCCTA CGCCGAGCTG GCCGAACCGG CCACCCCGGC GCAGTGGGGC GAGCGCCTGC AGGCCCTGCT CACGGTGTTC TTCGAGGCCC ACGACGAGCG CGACGAACTG CTTCTCACCC AGCTTCTGCA ATTGCTCGAA CGCTGGCAGG AACACTGCGC CTGTGCGGCC TTCGCCGAGC CGCTGCCGAT CAGCGTGATA CGCGAGGCCT GGCTCGGCGG CCTGGACCAG GGCGGCTTGA ACCAGCGCTT CCTGGCTGGC GCGGTGAGTT TCTGCACGCT GATGCCGATG CGCGCGATCC CGTTCCGGCT GGTCTGCCTG CTTGGCATGA ACGATGGCGA CTACCCCCGC CAGCAGTCGC CGCTGGATTT CGACCTGATG CGCAACGACT ACCGCCCCGG CGACCGCTCG CGGCGCGAGG ACGACCGCTA CCTGCTGCTC GAGGCGCTGC TCTCGGCGCG CGAGCAACTC TACGTGAGCT GGGTGGGGCG GAGTATCCGC GACAATGGCG AGCGGCCGCC CTCGGTGCTG ATCGGCCAGT TGCGCGATCA CCTGGCGGCC GGCTGGCGCC TGGATCCGGA CGGCGACGGC GAGGCGCTGC TGCGTGCCCT GACCCAGGAG CATCCGCTGC AGCCGTTCAG CCGCCGGTAT TTTCACGATG CGCCGGAGCA GGGCGTCGAT GGCCTGTTCA CCTACGCCCG CGAGTGGCGC GAGGTCCATC GCGAGGACGA GATCGGCGCT CCCGACGCCG AAGCGCCCCT GCCGCCGCTG GAACTGGAGG GCGCGCTGGG GCTGCGAGCG CTGGCGGAGT TCCTCGCCAA CCCGGTGAAT GCGTTCTTCC AGCAGCGGCT CAAGGTGCGT TTCGACGACG AGCAATTGAC CGGCAACGAC GAAGAGCCTT TCGAACTGGA CGCGCTGGAC AACTGGAAGC TGCAATTCGA GCTGACCGAA CGCATGAAGC GCTGGGTCGA GCGGGACTGG GATGCCGAGG GCCTGCCGGC GCAGTTGCAG GCCCAGGTCG AGCGACTGCG GCGACAGGGT CGCCTGCCGC TGGCGGCGTT CGGCGAGTTC TCCGCGCGCC ATTTGCTGCA ACCGCTGCCC GACCTGCTCT GGCGCTACCG CCAGGAAATC GAGCGCTGGC CGGAGGCGGT CGAGCAGCAG CAGGAGTTGC GCCATCGCCA TTCGTCCGGG CTGGAGCTGG AGGACTGGCT CGGCGGCTTG CGTCGCGACG CTTCCGGGCG CCTGGCGCGC CTGCAGTTGC TCAGCGGCAA GCTCCATGAA GGGCGCGGCT TCAAGTGGCA CAGCCTGGTG CGCCACTGGT TGCAGCACCT CGCCCTGCAA CGTCTCGGCC AGCCGGTGAG CAGCGTGCTG GTGAGCCAGA CCGGCACCCT GGAGATTCCG CCGCTGCCGA GCGAGCGCGC CGGCGAGTAC CTCGACCAGT TGATCGACGC CTGGCGCCAG GGCATGCGCC AGCCGTTGCC GGTGGCCTGC CGGACCGCTT TCGCCTGGCT CGCCAGTGGT GGCGCCGCAG AGCCCGAGAA AGCCATGCGC GAGGCGCGCA AGCGCTACGA GGGAGGGTTC GGCATGGGGG GCGAGGTGGA CGCCTCGCCG GCGCTGGCTC GGGTCTATCC GGACTTCGAC CGGCTGCTCG CCAGCGGTGA GTTCGCGCAC TGGGCCGAGC AGCTCTACGC GCCGCTGCTG GCTGCCCTGG GGCGTGGCGC GGAGGAGCAG GCATGA
|
Protein sequence | MPEPLGTTAL TPGFMIVHGN RLDDLRDLAV SWMRRYPLAP LESERVLVHS NGIAQWLKLA LAEDPREDGG GGGGIAAALE VQLPAQFLWQ AYRAVLGRES IPEVSELDKA PLTWRLMRLL PGLLERPEFR TLQRFLADDA DLRKRHQLAE RLADLFDQYQ VYRGDWLDDW SQGRDQLRTA NGQARPLGAD ERWQAELWRA LLADVGADSL ARSRSGVHRR FIEALRFASA APRALPRRVV VFGISSMPAQ TLEALAALAR FSQVLLCVHN PCRHHWADIV ADKDLLRHEY RRQQRRAGVP ADLDEDRQHQ HAQPLLAAWG KQGRDYINLL DSYDDPDSYR NLFGEVNGGR IDLFSEEAPH GLLGQLQDDI LELRPLAETR EHWPPVAPRS DASIRFHVAH SAQREVEILH DQLLARFNAD PSLKPRDVIV MVPDINAYAP HIEAVFGQVP RDDQRFIPYT LADQGQRGRE PLLIALEHLL KLPDSRFAVS EILDLLDVPA LRRRFGVDEA DLATLHRWIE GAGVRWGLDA AQRERLGLPA GLEGNSWRFG LRRMLLGYAV GEGAALQGIQ PYDEVGGLDA ALAGPLAVLL ERLEVAYAEL AEPATPAQWG ERLQALLTVF FEAHDERDEL LLTQLLQLLE RWQEHCACAA FAEPLPISVI REAWLGGLDQ GGLNQRFLAG AVSFCTLMPM RAIPFRLVCL LGMNDGDYPR QQSPLDFDLM RNDYRPGDRS RREDDRYLLL EALLSAREQL YVSWVGRSIR DNGERPPSVL IGQLRDHLAA GWRLDPDGDG EALLRALTQE HPLQPFSRRY FHDAPEQGVD GLFTYAREWR EVHREDEIGA PDAEAPLPPL ELEGALGLRA LAEFLANPVN AFFQQRLKVR FDDEQLTGND EEPFELDALD NWKLQFELTE RMKRWVERDW DAEGLPAQLQ AQVERLRRQG RLPLAAFGEF SARHLLQPLP DLLWRYRQEI ERWPEAVEQQ QELRHRHSSG LELEDWLGGL RRDASGRLAR LQLLSGKLHE GRGFKWHSLV RHWLQHLALQ RLGQPVSSVL VSQTGTLEIP PLPSERAGEY LDQLIDAWRQ GMRQPLPVAC RTAFAWLASG GAAEPEKAMR EARKRYEGGF GMGGEVDASP ALARVYPDFD RLLASGEFAH WAEQLYAPLL AALGRGAEEQ A
|
| |