Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55560 |
Symbol | |
ID | 4384922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4944407 |
End bp | 4945123 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327062 |
Product | hypothetical protein |
Protein accession | YP_792620 |
Protein GI | 116048581 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0430636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCC TCGGGGTGGC AAGGTCGTGC GCAGTGTCGT TGCTCGGTCT CGGCATGCTG CTGCCGGCGT CCGGCGCCGT GCCGGGCGAT GGCGGCAGGC CGCCGTTGCG CCTGGCGGTG CACGCGTTCG ATATTCCTCC GCAGAGCCTG GCATCGGCGC TGGTGACCTA CAGCGGGGTG ACGGGAATGG CGGTTCTGGT GGATGGCGAG CTGGCCCGTG GACGGCGCTC GGCCCGCTTG CAGGGGCGCT TCACCGCCAG CGACGCCCTG ACCCGACTGC TCGGCGGAAC CGGCCTGATG GCGCGCTACA CCAGCCAGGA AGCGTTCACC CTGCTGCCGG CGCAGGCCGT CAGGAACGCT GCGCCGCTGC CGGCAGAGAT GCCGAAGGTC GAGCAGCCGC TGGATCGGCG CTACGCGGGA GCGGTCCAGG CGGCGCTGGA AGAACAGTTG TGCCGCTCGC CGCGCACTCG TCCGGGTACC TATCGCGCGG TGCTGCAACT CTGGATCGGT CGCTTCGGCG AGGTTCGCCA CAGTCGCCTG CTCGGCTCGA CCGGCGACCC GCAGCGGGAC AGCGCCCTGG TGGAAAGCCT GCGCGGCGTG CGGGTGATGC AGGCGACGCC CGCTACGCTG GCCCAGCCGC TGACCATCCT GTTGCTGCCG AAGACGACGG GCAAGGCCAT GGAATGCAAG CTGACGGAGG GAGTGGGAGG GTCATGA
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Protein sequence | MSILGVARSC AVSLLGLGML LPASGAVPGD GGRPPLRLAV HAFDIPPQSL ASALVTYSGV TGMAVLVDGE LARGRRSARL QGRFTASDAL TRLLGGTGLM ARYTSQEAFT LLPAQAVRNA APLPAEMPKV EQPLDRRYAG AVQAALEEQL CRSPRTRPGT YRAVLQLWIG RFGEVRHSRL LGSTGDPQRD SALVESLRGV RVMQATPATL AQPLTILLLP KTTGKAMECK LTEGVGGS
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