Gene PA14_55560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55560 
Symbol 
ID4384922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4944407 
End bp4945123 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID639327062 
Producthypothetical protein 
Protein accessionYP_792620 
Protein GI116048581 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0430636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCC TCGGGGTGGC AAGGTCGTGC GCAGTGTCGT TGCTCGGTCT CGGCATGCTG 
CTGCCGGCGT CCGGCGCCGT GCCGGGCGAT GGCGGCAGGC CGCCGTTGCG CCTGGCGGTG
CACGCGTTCG ATATTCCTCC GCAGAGCCTG GCATCGGCGC TGGTGACCTA CAGCGGGGTG
ACGGGAATGG CGGTTCTGGT GGATGGCGAG CTGGCCCGTG GACGGCGCTC GGCCCGCTTG
CAGGGGCGCT TCACCGCCAG CGACGCCCTG ACCCGACTGC TCGGCGGAAC CGGCCTGATG
GCGCGCTACA CCAGCCAGGA AGCGTTCACC CTGCTGCCGG CGCAGGCCGT CAGGAACGCT
GCGCCGCTGC CGGCAGAGAT GCCGAAGGTC GAGCAGCCGC TGGATCGGCG CTACGCGGGA
GCGGTCCAGG CGGCGCTGGA AGAACAGTTG TGCCGCTCGC CGCGCACTCG TCCGGGTACC
TATCGCGCGG TGCTGCAACT CTGGATCGGT CGCTTCGGCG AGGTTCGCCA CAGTCGCCTG
CTCGGCTCGA CCGGCGACCC GCAGCGGGAC AGCGCCCTGG TGGAAAGCCT GCGCGGCGTG
CGGGTGATGC AGGCGACGCC CGCTACGCTG GCCCAGCCGC TGACCATCCT GTTGCTGCCG
AAGACGACGG GCAAGGCCAT GGAATGCAAG CTGACGGAGG GAGTGGGAGG GTCATGA
 
Protein sequence
MSILGVARSC AVSLLGLGML LPASGAVPGD GGRPPLRLAV HAFDIPPQSL ASALVTYSGV 
TGMAVLVDGE LARGRRSARL QGRFTASDAL TRLLGGTGLM ARYTSQEAFT LLPAQAVRNA
APLPAEMPKV EQPLDRRYAG AVQAALEEQL CRSPRTRPGT YRAVLQLWIG RFGEVRHSRL
LGSTGDPQRD SALVESLRGV RVMQATPATL AQPLTILLLP KTTGKAMECK LTEGVGGS