| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55550 |
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| Symbol | |
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| ID | 4384923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4943865 |
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| End bp | 4944410 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327061 |
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| Product | ECF subfamily RNA polymerase sigma-70 factor |
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| Protein accession | YP_792619 |
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| Protein GI | 116048582 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0813524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATT CGCGGCAAAG CGCGATGGTG AAGCTGTTCC TCGCCTCCTA CGACGACTTC
AAGGCGCGCC TGAAACGGCG CCTGGGCTCC GAGGATCTGG CGTGCGACGT GCTGCACGAA
ACCTACCTGA GAGTCGACCG GCTGGATGAT GCGTTGGAGG TCAAGAAGCC TCAGGCCTAC
CTGTTCCGTA TTGCCCTGAA CATTGCCGCC GACCGCCGCG AGGGCGACGC CCGCCTGCTC
ACCGGGGAGG AGGTGGCGGA GCTGTTGCAG GTGGCCGACG AAGGCCTCGA CCCGGAGCGC
ATCGTCGGCG GTCATGCCGA GATCCGTCGC CTGTTGGAGG CGCTCTGCGA ACTGCCGGCG
CGGCGTCGGC AGATTCTCAT CGCCTCGCGC CTGGAAGAGA CGCCGCATGC GGAAATCTCC
CGTCGCTTCG GCATTTCCAC CCGCACCGTG GAGAAGGAAC TCAAGGCCGC CCTGTGGTTC
TGCGCGGAGC GCCTGGAAAG AAAAGTCATC CAGAGGTTCG GTCCCGGGGC CGGAAAACCG
TCATAA
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| Protein sequence | MSDSRQSAMV KLFLASYDDF KARLKRRLGS EDLACDVLHE TYLRVDRLDD ALEVKKPQAY
LFRIALNIAA DRREGDARLL TGEEVAELLQ VADEGLDPER IVGGHAEIRR LLEALCELPA
RRRQILIASR LEETPHAEIS RRFGISTRTV EKELKAALWF CAERLERKVI QRFGPGAGKP
S
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