| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55520 |
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| Symbol | |
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| ID | 4384926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4941752 |
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| End bp | 4942201 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639327058 |
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| Product | type II secretion system protein |
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| Protein accession | YP_792616 |
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| Protein GI | 116048585 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0464256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGCGAC CCCGGCAAGG CGGTTTCACC CTGATCGAAC TGATGGTGGT GCTGGTAATC
GTCGGCATCG CCACGGCGGC CATCAGCCTG AGCGCCCGCC CCGACCCGAC GGGCCTGCTG
CGCCAGGATG CCGCGCGCCT GGCGCGGTTG CTGGAAATAG CCCAGGGCGA AGCACGGGTA
CGCGGTACGC CGATCCTCTG GCAGCCCAGC GCCAAGGGCT ATCGCTTCAG CCCGCAGGCC
TATCGCGGCA AGACCGACGC CTTCGCCGCC GACACCGAAT TGCGCGCGCG CGACTGGCAG
GCCGCGCCGC TGCGGGTCAG CGTGCGCCCG CCGCGACCGG TGTTGCTGGA CGCCGAATGG
ATCGGCGCGC CGTTGCGGAT AACGCTCTCC GACGGCCAAC ACAGCGTCAC CGTGCTGCGC
GAGGCGAACG GCCATGTCCG GGTACACTGA
|
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| Protein sequence | MRRPRQGGFT LIELMVVLVI VGIATAAISL SARPDPTGLL RQDAARLARL LEIAQGEARV
RGTPILWQPS AKGYRFSPQA YRGKTDAFAA DTELRARDWQ AAPLRVSVRP PRPVLLDAEW
IGAPLRITLS DGQHSVTVLR EANGHVRVH
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