Gene PA14_55460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55460 
Symbol 
ID4384932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4937352 
End bp4937945 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content70% 
IMG OID639327052 
Producttype II secretion system protein 
Protein accessionYP_792610 
Protein GI116048591 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000029628 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0351347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA ATAAGCGCCT GGCGGGCCTA CTGAATACCC CGGCGCAGCG CTGGAGTCCC 
CTGCTGCTGC GGCTGCAGGC CTACTGGCGG CAACTGGCGC CGCGCGAGCG CAAGATTCTC
GCCGGCGGTG GCCTGGCGCT ATGCCTGGCG CTGACCTGGC AAGTGTTCAT CGATCCGCCG
CTGGCGCGGA TCGAGCATTG GCAAGCCGAG CTGCCGCGCC TGCGTGCGCA GGCCGCGGCG
GTGGACGGCG TGTTGCGCGA GGTCGAGGCG TTGCGCGGTC CGACCCTGAG CGGTACGGCG
GACGCCGAGG CGATCCGTCG CAGCCTGCGC GATCAGGGAC TCGACGGTTT CCAACTGGAC
GCCCCGCAAC CGGGCCAATG GCAACTGGAC TTCGCCAGCG TGTCCGGCGA GGCCTTGCTG
CGCTGGCTGG CGCGCAGCCC GGCGGCGTTG CGCCTGAGCG TCAGCGAGGC GCAGGTGACG
CGTCTCGACG CTCCTTCCGA GGAGCGCTCC GGCTCTTCGA ACGAGCTGTC CGGCGGGCTG
GTGTCCGCCT CGATCCATTT GCAGTCGACT TCCGCTCCCA AGGATTCCCC ATGA
 
Protein sequence
MKMNKRLAGL LNTPAQRWSP LLLRLQAYWR QLAPRERKIL AGGGLALCLA LTWQVFIDPP 
LARIEHWQAE LPRLRAQAAA VDGVLREVEA LRGPTLSGTA DAEAIRRSLR DQGLDGFQLD
APQPGQWQLD FASVSGEALL RWLARSPAAL RLSVSEAQVT RLDAPSEERS GSSNELSGGL
VSASIHLQST SAPKDSP