Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55460 |
Symbol | |
ID | 4384932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4937352 |
End bp | 4937945 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327052 |
Product | type II secretion system protein |
Protein accession | YP_792610 |
Protein GI | 116048591 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000029628 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0351347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA ATAAGCGCCT GGCGGGCCTA CTGAATACCC CGGCGCAGCG CTGGAGTCCC CTGCTGCTGC GGCTGCAGGC CTACTGGCGG CAACTGGCGC CGCGCGAGCG CAAGATTCTC GCCGGCGGTG GCCTGGCGCT ATGCCTGGCG CTGACCTGGC AAGTGTTCAT CGATCCGCCG CTGGCGCGGA TCGAGCATTG GCAAGCCGAG CTGCCGCGCC TGCGTGCGCA GGCCGCGGCG GTGGACGGCG TGTTGCGCGA GGTCGAGGCG TTGCGCGGTC CGACCCTGAG CGGTACGGCG GACGCCGAGG CGATCCGTCG CAGCCTGCGC GATCAGGGAC TCGACGGTTT CCAACTGGAC GCCCCGCAAC CGGGCCAATG GCAACTGGAC TTCGCCAGCG TGTCCGGCGA GGCCTTGCTG CGCTGGCTGG CGCGCAGCCC GGCGGCGTTG CGCCTGAGCG TCAGCGAGGC GCAGGTGACG CGTCTCGACG CTCCTTCCGA GGAGCGCTCC GGCTCTTCGA ACGAGCTGTC CGGCGGGCTG GTGTCCGCCT CGATCCATTT GCAGTCGACT TCCGCTCCCA AGGATTCCCC ATGA
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Protein sequence | MKMNKRLAGL LNTPAQRWSP LLLRLQAYWR QLAPRERKIL AGGGLALCLA LTWQVFIDPP LARIEHWQAE LPRLRAQAAA VDGVLREVEA LRGPTLSGTA DAEAIRRSLR DQGLDGFQLD APQPGQWQLD FASVSGEALL RWLARSPAAL RLSVSEAQVT RLDAPSEERS GSSNELSGGL VSASIHLQST SAPKDSP
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