| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55430 |
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| Symbol | |
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| ID | 4382534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4932324 |
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| End bp | 4933538 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639327049 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_792607 |
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| Protein GI | 116048594 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000716105 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0429131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCT TCCGCTACGA AGCCGCCGAC GCCCAGGGCC GGATCGAGAC CGGCACCCTG
GAGGCGGACA GCCAGCGTGG CGCCCTTGGC CAACTGCGCG CCCGCGGCCT GACCCCGCTG
GAGGTCCGCG AACAGGCTGG CGGCGGGACC GGGCAAGGGG CGGGAGCGCT GTTCGCCCCG
CGCCTGTCCG ACGGCGACCT GGCCTGGGCC ACCCGCCAAC TGGCCAGCCT GCTGGCCGCC
AGCCTGCCGC TGGAGGCGGC GCTGAGCGCC ACCCTCGACC AGGCCGAGCG CAAGCACATC
GCCCAGACCC TGAGCGCCGT GCGCAGCGAC GTGCGCGGCG GCATGCGCCT GGCCGACGCC
CTTGCCGCAC GGCCGCGGGA CTTCCCGGAA ATCTACCGGG CGCTGGTGGC TGCGGGCGAG
GAGTCCGGCG ACCTGGCCCA GGTGATGGAG CGCCTGGCCG ACTACATCGA GGAACGCAAC
GCCCTGCGCG GCAAGATCCT CACCGCGTTC ATCTACCCGG CGGTGGTCGG CGTGGTCTCC
ATCGGCATCG TCATCTTCCT CCTCGGCTAC GTGGTGCCGC AGGTGGTCAG CGCCTTCTCC
CAGGCGCGCC AGGACCTGCC AGCGCTGACC CGGGCGATGC TCCAGGCCAG CGACTTCGTG
CGCGCCTGGG GCTGGCTCTG CGCCGGCGCC ATCGGTGGCG CTTACTGGGG CTGGCGCTTG
TACCTGCGCG ACCCGCAGGC GCGGCTCGGC TGGCACCGGC GAGTGCTGCG CCTGCCTCTG
CTCGGACGCT TCGTGCTCGG GGTGAATACC GCGCGCTTCG CCTCCACCCT GGCGATCCTC
GGCAGCGCCG GCGTACCGCT GCTGCGCGCG CTCGATGCGG CGCGCCAGAC GCTGGCCAAC
GACTGCCTCG CGCAGGCGGT GGAGGAGGCC ACCGCGCAGG TTCGCGAAGG TGTCTCGCTG
GCCTCGGCGC TGCGCACGCG GCAGGTATTC CCGCCGATCC TCACCCACCT GATCGCCAGC
GGCGAGAAGA CCGGCGCGCT GCCGCCGATG CTCGACCGCG CGGCGCAGAC CCTGTCGCGC
GACATCGAGC GCCGCGCCAT GGGCATGACC GCGCTGCTCG AGCCGCTGAT GATCGTGGTC
ATGGGCGGGG TGGTGCTGAC CATCGTGATG GCGGTGCTGA TGCCGATCAT CGAGATGAAC
CAGCTGGTCC AGTAG
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| Protein sequence | MQTFRYEAAD AQGRIETGTL EADSQRGALG QLRARGLTPL EVREQAGGGT GQGAGALFAP
RLSDGDLAWA TRQLASLLAA SLPLEAALSA TLDQAERKHI AQTLSAVRSD VRGGMRLADA
LAARPRDFPE IYRALVAAGE ESGDLAQVME RLADYIEERN ALRGKILTAF IYPAVVGVVS
IGIVIFLLGY VVPQVVSAFS QARQDLPALT RAMLQASDFV RAWGWLCAGA IGGAYWGWRL
YLRDPQARLG WHRRVLRLPL LGRFVLGVNT ARFASTLAIL GSAGVPLLRA LDAARQTLAN
DCLAQAVEEA TAQVREGVSL ASALRTRQVF PPILTHLIAS GEKTGALPPM LDRAAQTLSR
DIERRAMGMT ALLEPLMIVV MGGVVLTIVM AVLMPIIEMN QLVQ
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