Gene PA14_55360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55360 
SymbolexbB2 
ID4382539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4913235 
End bp4915082 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content70% 
IMG OID639327044 
Producttransport protein ExbB2 
Protein accessionYP_792602 
Protein GI116048599 
COG category[S] Function unknown 
COG ID[COG5306] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0512673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0265066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCT TATTGCTGAC ATCGCTGATC TGCCTGGGCC TGCTGGCCCC GGCCAGCGCC 
AGTGCCTGGT GGCAGGACGA CTGGCAGTAC CGCAAGCAGG TCTCGGTCGA TACCACCCCG
CAAGGCGCGG CGATCAACGA GAGTCTCGGT CGCCTGCCGT TGCTGGTGCG CCTGCATACC
GGCAACTTCA CCTTCGACGG GGTCAACGAG AACGGCTCGG ACATCCGCTT CGTCGCCGCC
GACGACAAGA CCGTGTTGCG CCACCAGGTC GAGAGCTTCG ACCCGCTGAT GGGCATGGCC
CTGATCTGGG TCGACGTGCC GCGGGTGGAG GGTGGCCAGC GCCAGGACAT CTGGATGTAC
TACGGCAACG CCAAGGCGCC GGAGAGCGGC AACGGCCAGT CGGTGTTCGA CCCGGACTAC
ACCCTGGTCT ATCACTTCGA CGGTGCGCCG GGCACTCCGC CGCGGGACTC CACCGCCTAC
GCCAACAATG CGCAGACCGC CGCCGGCAGT CCGGTGGAGG GCGTCATCGG TCGCTCCGCG
CAACTGCTGG GCCAGCCGCT GCTGCTGCCG GCCAGCCCAT CGCTGGCGGT GAGCGCCGGT
GGCACCTTCA GCTTCAGCGG CTGGGTGCGT CCCGACCAAC TGGCCGGCGA ACAGGTCCTG
CTGTCGCGCC GCGAAGGCGG CAACGCCCTG TTGGTCGGCC TGGCCCAGGG CGCGCCCTTC
GTCGAGCTGA ACGGTCAGCG CGCTGCCGCC AGCCAGGCCC TGGCGCAGGG GCAATGGCAG
CATCTGGCGC TGGTCGCCGA CGGTACCCGG CTGGCGCTGT ATCTCGGCGG TCGCGAAGTC
GCCAGCCTGG CGGCGGCGCT GCCGGCGTTC AGCGGCGCGA TCGCCATCGG CGCGGAAGGC
CAGGCCGCGC CTGCGGTCGC CACCGAAGCG GCAAGCGGGG AAGGTGAGGC GAGCGCCGCG
GCGCCGACCC TGCAACCCTT CCAGGGCGCC ATCGACGAGT TGCGCCTGTC GAAGATCGCC
CGCCCGGCGG CGCTGCTCCT CGCCGATGCC ACCGCCCAGG GCGCCGAGTC GCGCCTGGTG
GCCTACGGGG TCGACGAGAA GCAGTCCGGC TTCGGCTTCG GCAAGCTCGG CTTCCTGCTC
AACGCAGTGC CGCTGGATGC CTGGGTGATC ATCGCGATCC TGGCGCTGAT GATGGTCCAG
TCGTGGGTCA TCATGTACCG CAAGAACCAG AACGTCGGCC GTGTCAGTCG CGCCAACGGG
CTGTTCCGCG AGCGCTTCGC CGAGGTCGGC ACGCGCCTGG AACTGCTCGC CGACGACCGC
GAGCTGGCCG CCCGCCTGCA ACACTCCTCG CTGTGGCGCC TGTACCAGGT GGCGGTGAAG
GAGATCCGCA CCCGCCGCGA GCAGGGCGCC GACACCTCTT CCGTCTCCGC GGCCACCATC
GAGGCGATCC GCGCCTCCAT GGACGGCGTG CGCACCAAGG AGAACCAGCA GCTCGGCTCG
CGCTTGTCGA GCCTGTCCAA CGCCATCGCC GGCGGCCCCT ACATCGGCCT GCTCGGCACC
GTGCTGGGGA TCATGGTGGT GTTCCTCGGC ACCGCCATGG CCGGCGACGT CAACATCAAT
GCCATCGCCC CGGGCATGGC CGCCGCCCTG CTGGCCACGG CCATGGGCCT GTTCGTCGCG
ATCCCCGCGT TGTTCGGCTA CAACCGCCTG GTCACGCGGA ACAAGGAAGT CAGCGCGGAC
ATGCGGGTGT TCGTCGACGA GTTCGTCACC CGCCTCGCCG AGGTGCATGG CGAAAGCCAG
CTCAGCGAAG TGGCCCATCG TCGCAACGGC CAGCCGTTGC CGGCCTGA
 
Protein sequence
MYRLLLTSLI CLGLLAPASA SAWWQDDWQY RKQVSVDTTP QGAAINESLG RLPLLVRLHT 
GNFTFDGVNE NGSDIRFVAA DDKTVLRHQV ESFDPLMGMA LIWVDVPRVE GGQRQDIWMY
YGNAKAPESG NGQSVFDPDY TLVYHFDGAP GTPPRDSTAY ANNAQTAAGS PVEGVIGRSA
QLLGQPLLLP ASPSLAVSAG GTFSFSGWVR PDQLAGEQVL LSRREGGNAL LVGLAQGAPF
VELNGQRAAA SQALAQGQWQ HLALVADGTR LALYLGGREV ASLAAALPAF SGAIAIGAEG
QAAPAVATEA ASGEGEASAA APTLQPFQGA IDELRLSKIA RPAALLLADA TAQGAESRLV
AYGVDEKQSG FGFGKLGFLL NAVPLDAWVI IAILALMMVQ SWVIMYRKNQ NVGRVSRANG
LFRERFAEVG TRLELLADDR ELAARLQHSS LWRLYQVAVK EIRTRREQGA DTSSVSAATI
EAIRASMDGV RTKENQQLGS RLSSLSNAIA GGPYIGLLGT VLGIMVVFLG TAMAGDVNIN
AIAPGMAAAL LATAMGLFVA IPALFGYNRL VTRNKEVSAD MRVFVDEFVT RLAEVHGESQ
LSEVAHRRNG QPLPA