Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55360 |
Symbol | exbB2 |
ID | 4382539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4913235 |
End bp | 4915082 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327044 |
Product | transport protein ExbB2 |
Protein accession | YP_792602 |
Protein GI | 116048599 |
COG category | [S] Function unknown |
COG ID | [COG5306] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0512673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0265066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGCT TATTGCTGAC ATCGCTGATC TGCCTGGGCC TGCTGGCCCC GGCCAGCGCC AGTGCCTGGT GGCAGGACGA CTGGCAGTAC CGCAAGCAGG TCTCGGTCGA TACCACCCCG CAAGGCGCGG CGATCAACGA GAGTCTCGGT CGCCTGCCGT TGCTGGTGCG CCTGCATACC GGCAACTTCA CCTTCGACGG GGTCAACGAG AACGGCTCGG ACATCCGCTT CGTCGCCGCC GACGACAAGA CCGTGTTGCG CCACCAGGTC GAGAGCTTCG ACCCGCTGAT GGGCATGGCC CTGATCTGGG TCGACGTGCC GCGGGTGGAG GGTGGCCAGC GCCAGGACAT CTGGATGTAC TACGGCAACG CCAAGGCGCC GGAGAGCGGC AACGGCCAGT CGGTGTTCGA CCCGGACTAC ACCCTGGTCT ATCACTTCGA CGGTGCGCCG GGCACTCCGC CGCGGGACTC CACCGCCTAC GCCAACAATG CGCAGACCGC CGCCGGCAGT CCGGTGGAGG GCGTCATCGG TCGCTCCGCG CAACTGCTGG GCCAGCCGCT GCTGCTGCCG GCCAGCCCAT CGCTGGCGGT GAGCGCCGGT GGCACCTTCA GCTTCAGCGG CTGGGTGCGT CCCGACCAAC TGGCCGGCGA ACAGGTCCTG CTGTCGCGCC GCGAAGGCGG CAACGCCCTG TTGGTCGGCC TGGCCCAGGG CGCGCCCTTC GTCGAGCTGA ACGGTCAGCG CGCTGCCGCC AGCCAGGCCC TGGCGCAGGG GCAATGGCAG CATCTGGCGC TGGTCGCCGA CGGTACCCGG CTGGCGCTGT ATCTCGGCGG TCGCGAAGTC GCCAGCCTGG CGGCGGCGCT GCCGGCGTTC AGCGGCGCGA TCGCCATCGG CGCGGAAGGC CAGGCCGCGC CTGCGGTCGC CACCGAAGCG GCAAGCGGGG AAGGTGAGGC GAGCGCCGCG GCGCCGACCC TGCAACCCTT CCAGGGCGCC ATCGACGAGT TGCGCCTGTC GAAGATCGCC CGCCCGGCGG CGCTGCTCCT CGCCGATGCC ACCGCCCAGG GCGCCGAGTC GCGCCTGGTG GCCTACGGGG TCGACGAGAA GCAGTCCGGC TTCGGCTTCG GCAAGCTCGG CTTCCTGCTC AACGCAGTGC CGCTGGATGC CTGGGTGATC ATCGCGATCC TGGCGCTGAT GATGGTCCAG TCGTGGGTCA TCATGTACCG CAAGAACCAG AACGTCGGCC GTGTCAGTCG CGCCAACGGG CTGTTCCGCG AGCGCTTCGC CGAGGTCGGC ACGCGCCTGG AACTGCTCGC CGACGACCGC GAGCTGGCCG CCCGCCTGCA ACACTCCTCG CTGTGGCGCC TGTACCAGGT GGCGGTGAAG GAGATCCGCA CCCGCCGCGA GCAGGGCGCC GACACCTCTT CCGTCTCCGC GGCCACCATC GAGGCGATCC GCGCCTCCAT GGACGGCGTG CGCACCAAGG AGAACCAGCA GCTCGGCTCG CGCTTGTCGA GCCTGTCCAA CGCCATCGCC GGCGGCCCCT ACATCGGCCT GCTCGGCACC GTGCTGGGGA TCATGGTGGT GTTCCTCGGC ACCGCCATGG CCGGCGACGT CAACATCAAT GCCATCGCCC CGGGCATGGC CGCCGCCCTG CTGGCCACGG CCATGGGCCT GTTCGTCGCG ATCCCCGCGT TGTTCGGCTA CAACCGCCTG GTCACGCGGA ACAAGGAAGT CAGCGCGGAC ATGCGGGTGT TCGTCGACGA GTTCGTCACC CGCCTCGCCG AGGTGCATGG CGAAAGCCAG CTCAGCGAAG TGGCCCATCG TCGCAACGGC CAGCCGTTGC CGGCCTGA
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Protein sequence | MYRLLLTSLI CLGLLAPASA SAWWQDDWQY RKQVSVDTTP QGAAINESLG RLPLLVRLHT GNFTFDGVNE NGSDIRFVAA DDKTVLRHQV ESFDPLMGMA LIWVDVPRVE GGQRQDIWMY YGNAKAPESG NGQSVFDPDY TLVYHFDGAP GTPPRDSTAY ANNAQTAAGS PVEGVIGRSA QLLGQPLLLP ASPSLAVSAG GTFSFSGWVR PDQLAGEQVL LSRREGGNAL LVGLAQGAPF VELNGQRAAA SQALAQGQWQ HLALVADGTR LALYLGGREV ASLAAALPAF SGAIAIGAEG QAAPAVATEA ASGEGEASAA APTLQPFQGA IDELRLSKIA RPAALLLADA TAQGAESRLV AYGVDEKQSG FGFGKLGFLL NAVPLDAWVI IAILALMMVQ SWVIMYRKNQ NVGRVSRANG LFRERFAEVG TRLELLADDR ELAARLQHSS LWRLYQVAVK EIRTRREQGA DTSSVSAATI EAIRASMDGV RTKENQQLGS RLSSLSNAIA GGPYIGLLGT VLGIMVVFLG TAMAGDVNIN AIAPGMAAAL LATAMGLFVA IPALFGYNRL VTRNKEVSAD MRVFVDEFVT RLAEVHGESQ LSEVAHRRNG QPLPA
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