| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55340 |
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| Symbol | exbD2 |
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| ID | 4382540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4912805 |
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| End bp | 4913224 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639327043 |
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| Product | transport protein ExbD |
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| Protein accession | YP_792601 |
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| Protein GI | 116048600 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00981285 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTTCCG TGAACAGCAG CCACGACGAT GACGACGACG GCGCCGTCGA CAGCATCAAC
ATCACCCCGC TGGTGGACGT GCTGATGGTG GTGCTGGTGA TGTTCATCCT CACCGCCACC
GCCCAGGTCG CCGGGATCCA GATCAACCTG CCGAAGGCCA GTGCCACCGT GGCGCTGTCG
CAGCCCAAGA CCAAGGCGAT CTCGGTGAAC GACGCCGGCC AGGTGTTCCT CGACGCCTAC
CCGGTGACCC TGCCCGAGCT GGAGGACCGC CTGCGTACGG AGAAGGCCCT CAACCCCGAC
TTCCCGGTAG TGGTCCGCGG CGACGCCACG GTGCAGTACC AGAAGGTCAT CGAGGTCCTC
GACCTGCTGC GCCGCCTGGA GCTGTCCCAG GTCGGCCTGG TCACCGGCAA ACCGACCTGA
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| Protein sequence | MASVNSSHDD DDDGAVDSIN ITPLVDVLMV VLVMFILTAT AQVAGIQINL PKASATVALS
QPKTKAISVN DAGQVFLDAY PVTLPELEDR LRTEKALNPD FPVVVRGDAT VQYQKVIEVL
DLLRRLELSQ VGLVTGKPT
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