Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55240 |
Symbol | |
ID | 4382548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4905964 |
End bp | 4906629 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639327035 |
Product | hypothetical protein |
Protein accession | YP_792593 |
Protein GI | 116048608 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000000168814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGAGC GGCATTGGCA GGGCGAGGTC TGGCTGGCGC GGGACCACGC GCTGTTCGCC GGGGTCAACG GCGATACCCG CGAGCACGCG CACTATGCCC ACCAGTTGCT GCTGGCGGAG ACGCCGCTGC GGGTGCGCGT CGCTGGCCAG GTACTGGAGG CCCGGCGCTT GCTGGTGCCC TCGCTGCAAG CCCATCGCGT CGACGCGTCG CAGCCGTTGC TGGCGCTGTA CGCCGAGCCG CTGGCGTTCG ACAGCGACGA CCTGCGTCAG CTTCTCGAGG ACGCTCCCGG CGAGCCCGAG GCGTTGCTGG GGCGGCTTGC GCGGCTGCCT CGTCGACGGC TCGACCGCCG CGTCGAAAAG GCCCTGGCGG CGCTCGACGA GCAACTCGCG GCGCGGGTCG AGGCGGAAAG ACTGGCGCGC AGCGCCAGTC TTTCGCTGAG CCAACTGGAG CGGCTGTTCG CCGTCCAGGT CGGCCTGTCG GTACGCCGCC TGGTGCTCTG GCGCCGCCTG TACCTGGCCT TCGCCCTGGC CTTGCAGGGG CGCAGCCTGA CCGAGGCGGC CCATCACGCC GGCTTCGCCG ACGCCGCGCA CCTGTCGCGC AGCGTACGCA GCCTGCTCGG TATCCGCGCC GGCCTGTCGC TGCCGCACCT ACGCCTGGCC GGCTGA
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Protein sequence | MTERHWQGEV WLARDHALFA GVNGDTREHA HYAHQLLLAE TPLRVRVAGQ VLEARRLLVP SLQAHRVDAS QPLLALYAEP LAFDSDDLRQ LLEDAPGEPE ALLGRLARLP RRRLDRRVEK ALAALDEQLA ARVEAERLAR SASLSLSQLE RLFAVQVGLS VRRLVLWRRL YLAFALALQG RSLTEAAHHA GFADAAHLSR SVRSLLGIRA GLSLPHLRLA G
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