Gene PA14_55240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55240 
Symbol 
ID4382548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4905964 
End bp4906629 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID639327035 
Producthypothetical protein 
Protein accessionYP_792593 
Protein GI116048608 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000000168814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGAGC GGCATTGGCA GGGCGAGGTC TGGCTGGCGC GGGACCACGC GCTGTTCGCC 
GGGGTCAACG GCGATACCCG CGAGCACGCG CACTATGCCC ACCAGTTGCT GCTGGCGGAG
ACGCCGCTGC GGGTGCGCGT CGCTGGCCAG GTACTGGAGG CCCGGCGCTT GCTGGTGCCC
TCGCTGCAAG CCCATCGCGT CGACGCGTCG CAGCCGTTGC TGGCGCTGTA CGCCGAGCCG
CTGGCGTTCG ACAGCGACGA CCTGCGTCAG CTTCTCGAGG ACGCTCCCGG CGAGCCCGAG
GCGTTGCTGG GGCGGCTTGC GCGGCTGCCT CGTCGACGGC TCGACCGCCG CGTCGAAAAG
GCCCTGGCGG CGCTCGACGA GCAACTCGCG GCGCGGGTCG AGGCGGAAAG ACTGGCGCGC
AGCGCCAGTC TTTCGCTGAG CCAACTGGAG CGGCTGTTCG CCGTCCAGGT CGGCCTGTCG
GTACGCCGCC TGGTGCTCTG GCGCCGCCTG TACCTGGCCT TCGCCCTGGC CTTGCAGGGG
CGCAGCCTGA CCGAGGCGGC CCATCACGCC GGCTTCGCCG ACGCCGCGCA CCTGTCGCGC
AGCGTACGCA GCCTGCTCGG TATCCGCGCC GGCCTGTCGC TGCCGCACCT ACGCCTGGCC
GGCTGA
 
Protein sequence
MTERHWQGEV WLARDHALFA GVNGDTREHA HYAHQLLLAE TPLRVRVAGQ VLEARRLLVP 
SLQAHRVDAS QPLLALYAEP LAFDSDDLRQ LLEDAPGEPE ALLGRLARLP RRRLDRRVEK
ALAALDEQLA ARVEAERLAR SASLSLSQLE RLFAVQVGLS VRRLVLWRRL YLAFALALQG
RSLTEAAHHA GFADAAHLSR SVRSLLGIRA GLSLPHLRLA G