Gene PA14_55000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55000 
Symbol 
ID4384895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4884920 
End bp4885870 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content62% 
IMG OID639327014 
ProductABC transporter periplasmic protein 
Protein accessionYP_792572 
Protein GI116048628 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000300929 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.23154e-21 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTACCG CTCGATCACT CCTGACGCTG TTCTTTGCCG TGGGGTCCGC CGCCGCACAG 
GCGCAGGACT ACCCACGGAC CATCGTGGAT GATCGCAACC AATCCGTGGT GATCGAACGC
GCGCCACGAA CCGTCGCATC AATTTCGACC TTCGGGGCTG ACGTCATGGT TGCGCTCGAC
CGACAGGTCG CGGGGCTTTC CACGCTCAAC AACCAGCGCT CCGCCTTCTT GGGAGATGCC
GCTGCCAAGG CCGTTAACCT GGGCGAAGTG CACCAGACCA ACCTTGAGGT TCTGGCGAAA
CTGTCGCCGG ATCTGACCAT CGGCTTACGC ACGTATACGG AACCCTTCGC CAAGAAGATC
GAGGAGACTG GGGCGTTCCT GGCATTCGAC CTGATCACGT TGAATGATTC TGTGAGTGCA
GTGGAGCGAG CCACACGAGC GCTCGGTGCG GACAGCCAGG GCGCGGCTAT GAACCAGGCT
TTCCTGGACG AGCTGGAGGC GACCGGCAAA CGCGCGCCGG GAAAGGTCAG CGCGGTTTTC
CTCTGGCATT GGGGCAATGC TCCCTATGCC TACTACAGCA ACCACCTGAC GACTCAGGTG
ATGGAGCGCC TGGGAGCAAC CAACGTCCAG GGCGAACCGC CCAAGGGCAT GGAATCTGCC
GATTCGTCCG TGATAACCAT GGAGACCCTG CTGCGGCTGA ATCCGGATGT GATCATCTCG
TTCAAGGGTG ATGCCGGACC GTTCACCAAG CACCCGGCTT GGAATCGCCT CAAGGCGGTC
CAGTCCGGCC GGGCCTGGCG GGTCTCAGAC CAGTACATCA TGTCGCATGG CCCCATAGCG
CGACGGCAGG TGCTGCACGA AATGGCGCAT CTGCTCTACC CGGGGGTGTT CCCCGAGCCC
ACGGGCATTC CGGCTGCGGC CCGCGCCAAG CCCATGGATT TCGAGCGCTG A
 
Protein sequence
MRTARSLLTL FFAVGSAAAQ AQDYPRTIVD DRNQSVVIER APRTVASIST FGADVMVALD 
RQVAGLSTLN NQRSAFLGDA AAKAVNLGEV HQTNLEVLAK LSPDLTIGLR TYTEPFAKKI
EETGAFLAFD LITLNDSVSA VERATRALGA DSQGAAMNQA FLDELEATGK RAPGKVSAVF
LWHWGNAPYA YYSNHLTTQV MERLGATNVQ GEPPKGMESA DSSVITMETL LRLNPDVIIS
FKGDAGPFTK HPAWNRLKAV QSGRAWRVSD QYIMSHGPIA RRQVLHEMAH LLYPGVFPEP
TGIPAAARAK PMDFER