| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_54970 |
|---|
| Symbol | |
|---|
| ID | 4384897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4881162 |
|---|
| End bp | 4882919 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639327012 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_792570 |
|---|
| Protein GI | 116048630 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000479716 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 4.5900199999999996e-21 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCGG TCACCTCTTG GACAAGCATT CGACGCATCA TCCAGCGCAG TGGCGCGCCT
ACCTCCGCCC TCACCTTGGG ATTGGCGCTG CGCGTGCTGG AACGGTGTTC CGAAGTGCTG
CCCTATCTGC TGTGCTGGCT ATGGCTTGGC GCCGTCCTGC CACTTTCTTT GCCAGGTTTT
GCCTGGACAG CCACCTGGGC GGCCAGTCCG CAATGGCTGG CTCTGACCCT AGCTTGCCTG
TTCCTCATGC AATGGGCTTT CGCCTTCGGC GGCCAGAAAT GTTGCTTTCT GAACAGTTAC
CAGATCATCG AACGCTATCG ACAGGGGCTG CTCGAGCGAG TCCGCAACAT GCCGATCGGC
GTGTTGAGAG GACGGCAGGT GGGGCACATG GCCGACCTGC TCACCGACGA CATCAATCGT
GTCGAAGCCA TATTTGCCCA TGTCCTGGCG GATTTCGTCG CCGCCGCGGG CCTGGCGCTG
ACGACGATCC TGCTGCTGGC AGCTATCGAG TGGCGGCTGG CCCTGGCGCT TGCTGGGCTC
GCGCCCCTGG CCATGCTCGT CCTGATTGCC AGTGGGCGAC TGTTCGAGCA GGCGGTCCAG
CGCAAACACG CGCGCTTCAA GGCGACATCC GGGATGTTGG TGGAGTTCAT CGGCGGCCTG
GCGACGTTAC GCCTCTTCAA TCACTCGCGC GCCTGGTCGC AGCAGTTAGA CCAGGCGTTC
ACCGAACTCA AGGCGCTCAG CCTGGGGATC GAGAAATGGG GCGGCGGTCC GGTCATGCTC
TTCAGACTGA TCGTCGAGTG TGGCCTCGTC GTCCTGTTCA TTGCAGGCGG CTGGAGCATG
TTCTCCCATG AATACCCCGC GCTGGTTTGG CTGGCGTTCA TTCTGCTGTC TTACAAGTTC
ATTGGTCCGC TGCTGGAGTT GGCCGAATAC TTGGTGATGC TCCGCCATGC TTGCCAGAGC
GAGATGAAGC TCGACGAGCT ATGGCGCGTC CCGCTCCTGC CCGAACCCGC CCTGGCTAGG
CGGCCGGATG GTCTGGCCGT GCAGTTCGAT CGCGTGTCGT TCGCCTACGG CGATCGGCTC
GTGCTACGCG ATGTCAGCTT CGTGGTGCCG CCTGGTAGCG TCACCGCCGT GGTTGGTCCT
TCCGGCGCAG GCAAGAGCAC GCTGTTGCAT CTGCTTGCGC GCTTTCATAT GCCCGACAGC
GGCGCGATAC GCATTGGCGG CTTGGATCTG CGTGATATCG GCTCCGACCA GTTGTATCGC
GTCGTCAGCA TGGTCTTCCA GCAGGTACAA CTGTTCGACG GCAGCATTAT CGACAACGTG
CGTGCAGGTC GCGAGCAGGC CAGCGACGAG GAGGTGATTC AGGCCGCCGA GGCGGCTCAT
TGTGATGAGT TCATCGCCAG GCTTGCTGAT GGCTACCAGA CAAAGGTCGG CGAATCGGGG
TTCGGCCTTT CGGGAGGAGA GCGGCAGCGG CTGTCGATCG CCCGGGCACT GCTCAAGGAT
GCGCCGCTGC TCCTGCTGGA TGAAGTAACC GCCTCGGTAG ACCCACGCTC CCAGCACGCC
ATCCAGACCT CTCTCGGCCA ATTGGCTGCG GGGCGCAGCG TCATCATGGT CGCCCACAGG
CTCAACACCA TCAGGCACGC CGACCAGATA CTGGTTCTGG ATCAAGGCGC CTTGGTCGAG
GCTGGAACCC ACCAGTCCCT GCTTGCGAGA AATGGTCTGT ACGCCGCGAT GTGGAGGGCG
CAAACATCCA ACGGCTAG
|
|---|
| Protein sequence | MEAVTSWTSI RRIIQRSGAP TSALTLGLAL RVLERCSEVL PYLLCWLWLG AVLPLSLPGF
AWTATWAASP QWLALTLACL FLMQWAFAFG GQKCCFLNSY QIIERYRQGL LERVRNMPIG
VLRGRQVGHM ADLLTDDINR VEAIFAHVLA DFVAAAGLAL TTILLLAAIE WRLALALAGL
APLAMLVLIA SGRLFEQAVQ RKHARFKATS GMLVEFIGGL ATLRLFNHSR AWSQQLDQAF
TELKALSLGI EKWGGGPVML FRLIVECGLV VLFIAGGWSM FSHEYPALVW LAFILLSYKF
IGPLLELAEY LVMLRHACQS EMKLDELWRV PLLPEPALAR RPDGLAVQFD RVSFAYGDRL
VLRDVSFVVP PGSVTAVVGP SGAGKSTLLH LLARFHMPDS GAIRIGGLDL RDIGSDQLYR
VVSMVFQQVQ LFDGSIIDNV RAGREQASDE EVIQAAEAAH CDEFIARLAD GYQTKVGESG
FGLSGGERQR LSIARALLKD APLLLLDEVT ASVDPRSQHA IQTSLGQLAA GRSVIMVAHR
LNTIRHADQI LVLDQGALVE AGTHQSLLAR NGLYAAMWRA QTSNG
|
|---|
| |