Gene PA14_54710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54710 
Symbol 
ID4385286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4851251 
End bp4852165 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content72% 
IMG OID639326987 
Productputative transcriptional regulator 
Protein accessionYP_792546 
Protein GI116048654 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0282629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000000212849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGATC TACGCCAGTT CCGCCACTTC GTCGCCCTCG CCGAGCACGG CCACTATGCC 
CGCGCCGCCG AAGCGGTGAA TCTCAGCCAG CCGGCGCTGT CCCGCAGCAT CCAGGCGCTG
GAGGGACAGT TGGGTTGCAC CCTGGTGGAG CGCGGCAGCC GCGGCGTGGC CCTCACGGCC
CACGGCCGGC TGGTGCTGGA ACACGCTCGG CGCCTGCTGG CCGGGCATCG CGCACTGCAC
AACGCGGTAA GCCAACTGGG CAATCTCGAC AGCGGCGAGC TACGCCTGGG CGGCGGTCCC
TTCCCCGCCG CACGGCTGTT GCCCGAGGCA CTGGCCAGTT TCTCCAGCGC CCACCCACGC
GTGCGCGTCG CACTGCTCAT CGAGGACTGG CAGACCCTGC GCCAGCGCCT GCTGGATGAC
GCCGTCGAAC TCTTCGTCGC CGATATCCGC GAGCTGCAAG GCGATCCGCA GTTGCGCATC
CACCCGCTAC GCGAGCATCC CGGCGTACTC TTCTGCCGCC CCGGCCATCC GCTGCTGGGT
CTGGAGCGGC CGAGCGCCGG GCAATTGGCC GATTACCCGC TGGCCGGCCC GCGTCTGCCC
GCGGAAGTCC GCGGCGACCT GGCGCGCCTG CTGCAACGCG ACGAACCGCT CGGCATACAG
TGCGACGACG TGCTAATGCT CAAGGGCCTG GTCGGCTCCA GCGAGCTGAT CAGCCTGGCG
CCCTGGGACG TGGTTGCCGC CGACGTCGAG GCCGGCCGCC TGGCGCTGCT GCCCTGGCCC
GCCGGCGCCG AGCCCGCCCG CGCCAAGGGC TCCGCCTACG GTCTGGTCAG CCGTGCCGGC
CGCAGCCTGT CGCCGGCCGC GGCAGTGTTC GTCGAGCGGG TGCTGGAACA GGACCGGCGC
TTCGCCGCCA CCTGA
 
Protein sequence
MSDLRQFRHF VALAEHGHYA RAAEAVNLSQ PALSRSIQAL EGQLGCTLVE RGSRGVALTA 
HGRLVLEHAR RLLAGHRALH NAVSQLGNLD SGELRLGGGP FPAARLLPEA LASFSSAHPR
VRVALLIEDW QTLRQRLLDD AVELFVADIR ELQGDPQLRI HPLREHPGVL FCRPGHPLLG
LERPSAGQLA DYPLAGPRLP AEVRGDLARL LQRDEPLGIQ CDDVLMLKGL VGSSELISLA
PWDVVAADVE AGRLALLPWP AGAEPARAKG SAYGLVSRAG RSLSPAAAVF VERVLEQDRR
FAAT