Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_54710 |
Symbol | |
ID | 4385286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4851251 |
End bp | 4852165 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639326987 |
Product | putative transcriptional regulator |
Protein accession | YP_792546 |
Protein GI | 116048654 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0282629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000000212849 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGATC TACGCCAGTT CCGCCACTTC GTCGCCCTCG CCGAGCACGG CCACTATGCC CGCGCCGCCG AAGCGGTGAA TCTCAGCCAG CCGGCGCTGT CCCGCAGCAT CCAGGCGCTG GAGGGACAGT TGGGTTGCAC CCTGGTGGAG CGCGGCAGCC GCGGCGTGGC CCTCACGGCC CACGGCCGGC TGGTGCTGGA ACACGCTCGG CGCCTGCTGG CCGGGCATCG CGCACTGCAC AACGCGGTAA GCCAACTGGG CAATCTCGAC AGCGGCGAGC TACGCCTGGG CGGCGGTCCC TTCCCCGCCG CACGGCTGTT GCCCGAGGCA CTGGCCAGTT TCTCCAGCGC CCACCCACGC GTGCGCGTCG CACTGCTCAT CGAGGACTGG CAGACCCTGC GCCAGCGCCT GCTGGATGAC GCCGTCGAAC TCTTCGTCGC CGATATCCGC GAGCTGCAAG GCGATCCGCA GTTGCGCATC CACCCGCTAC GCGAGCATCC CGGCGTACTC TTCTGCCGCC CCGGCCATCC GCTGCTGGGT CTGGAGCGGC CGAGCGCCGG GCAATTGGCC GATTACCCGC TGGCCGGCCC GCGTCTGCCC GCGGAAGTCC GCGGCGACCT GGCGCGCCTG CTGCAACGCG ACGAACCGCT CGGCATACAG TGCGACGACG TGCTAATGCT CAAGGGCCTG GTCGGCTCCA GCGAGCTGAT CAGCCTGGCG CCCTGGGACG TGGTTGCCGC CGACGTCGAG GCCGGCCGCC TGGCGCTGCT GCCCTGGCCC GCCGGCGCCG AGCCCGCCCG CGCCAAGGGC TCCGCCTACG GTCTGGTCAG CCGTGCCGGC CGCAGCCTGT CGCCGGCCGC GGCAGTGTTC GTCGAGCGGG TGCTGGAACA GGACCGGCGC TTCGCCGCCA CCTGA
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Protein sequence | MSDLRQFRHF VALAEHGHYA RAAEAVNLSQ PALSRSIQAL EGQLGCTLVE RGSRGVALTA HGRLVLEHAR RLLAGHRALH NAVSQLGNLD SGELRLGGGP FPAARLLPEA LASFSSAHPR VRVALLIEDW QTLRQRLLDD AVELFVADIR ELQGDPQLRI HPLREHPGVL FCRPGHPLLG LERPSAGQLA DYPLAGPRLP AEVRGDLARL LQRDEPLGIQ CDDVLMLKGL VGSSELISLA PWDVVAADVE AGRLALLPWP AGAEPARAKG SAYGLVSRAG RSLSPAAAVF VERVLEQDRR FAAT
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