| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_54690 |
|---|
| Symbol | |
|---|
| ID | 4385288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4848496 |
|---|
| End bp | 4849137 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639326985 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792544 |
|---|
| Protein GI | 116048656 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2910] Putative NADH-flavin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.347798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00000151278 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CCCTGATCGG CGCCACCGGC CACGTCGGCC ACTATTTCCT CAACGAAGCC
CTGCAACGCG GCCACGCGGT AACCGCCCTG GTCCGCGACC CGAGCAAGCT GGCGGCGCGC
GACGGCCTCG GCGTAGTGCA GGCGGACGTC AGCGACCCGG CCCAGGTGGC CAGCGCCGTG
GCAGGCCACG AGGTGGTCAT CAGCGCTTTC AACGGCGGCT GGGGCAGCGC CGACCTCCGC
GCCCGCCACG CCGCCGGCAG CCAGGCCATT CTCGACGGCG TGAAACGCTC CGGCGTGCCG
CGCCTGCTGG TTCTCGGCGG CGCCGGGAGC CTGGAGATCG CCCCCGGCCA GCGCCTGGTG
GACAGCCCGG AATTCCCCGA GCAGTGGAAA CAGGGCGCCC TCGGCGCCGC CGACGCCCTC
GACCAACTGC GCGGCGAGCA ACGACTGGAC TGGGTGTTCC TCAGCCCGGC GATGCTCCTC
GAACCCGGCC AGCGCAGCGG CAAGTTCCGC CTCGGCGGCG ACCAGGTCCT GTTCGACGCC
AAGGGCGAGA GCCGGATTTC CCTGGAAGAC CTGGCGGTAG CCATGCTCGA CGAGGCCGAG
CAGCCCCGTC ATCATCGCCA GCGCTTCACC GTGGCCTACT GA
|
|---|
| Protein sequence | MKIALIGATG HVGHYFLNEA LQRGHAVTAL VRDPSKLAAR DGLGVVQADV SDPAQVASAV
AGHEVVISAF NGGWGSADLR ARHAAGSQAI LDGVKRSGVP RLLVLGGAGS LEIAPGQRLV
DSPEFPEQWK QGALGAADAL DQLRGEQRLD WVFLSPAMLL EPGQRSGKFR LGGDQVLFDA
KGESRISLED LAVAMLDEAE QPRHHRQRFT VAY
|
|---|
| |