Gene PA14_54600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54600 
Symbol 
ID4385296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4840050 
End bp4840871 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content66% 
IMG OID639326977 
Producthypothetical protein 
Protein accessionYP_792536 
Protein GI116048664 
COG category[V] Defense mechanisms 
COG ID[COG2720] Uncharacterized vancomycin resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0220314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0306544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC CCCTATCGCT CTACCACCCC TGGCTCTACT GGCTGCGGGT CTGGCAACGA 
CGTCTCTGGC GGCACTGCCG CTGGCGTCTT GGCGGCCGTC GCTACGTGCG GCTGCCATCG
GTCGACGAGC GCCTGCCGTA CCGCTACATC AAGCACACCT CGAAGTTGAT CCGCCGCCTC
GGCGACAGCG ACCTCGCCCT GCAACGCAAC AAGGTGGTCA ACCTGCGCCT GGCGGTGGAC
TGCATGAACG GCGTGCGCAT CGGCCCCGGC GAGTACTTCT CGTTCTGCCG GCTGGTCGGT
CGGCCCAGCG CCCGGCGTGG CTTCGTCGAA GGTATGGAGT TGTCCTTCGG CGAGGCGCGC
AGCGGAATCG GCGGCGGCAT CTGCCAACTG AGCAACCTGA TCCACTGGAT GGCCCTGCAT
TCGCCGCTGC GCGTGGTGGA GCGGGCCAAC CACAGCTTCG ACCCGTTTCC CGACGAGGGA
CGGATCCTGC CGTTCGGCTC GGGCGCGGCG ATCTTCTACA ACTTCATCGA CCTGGTGCTG
CACAATCCGA CGGCGGATAC CTTCCAGTTG CGCTTCCATA TCGCCGCCCA CCAACTGGAA
GGCGAACTGC TGTGCAGCGC GCCGCGCCCT GTGCGCTACC ACGTCTACGA GAGGGCCCAG
CGTTTTGTCC GCGACGGCGA GGCAGTGCTG AGGCTCAACG AGATCTGGCG CGACATCCGG
GAAAAGGGCC AGGCCGGCAC CCTGCTGGCC AGCGAGTGCC TGTACCGCAA CCGGGTGCGC
GTGAAGTATC CGCTGGAAGA GGCCCGCCTG TCCCGAGATT GA
 
Protein sequence
MRKPLSLYHP WLYWLRVWQR RLWRHCRWRL GGRRYVRLPS VDERLPYRYI KHTSKLIRRL 
GDSDLALQRN KVVNLRLAVD CMNGVRIGPG EYFSFCRLVG RPSARRGFVE GMELSFGEAR
SGIGGGICQL SNLIHWMALH SPLRVVERAN HSFDPFPDEG RILPFGSGAA IFYNFIDLVL
HNPTADTFQL RFHIAAHQLE GELLCSAPRP VRYHVYERAQ RFVRDGEAVL RLNEIWRDIR
EKGQAGTLLA SECLYRNRVR VKYPLEEARL SRD