Gene PA14_54500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54500 
Symbol 
ID4385207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4831499 
End bp4832881 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content70% 
IMG OID639326969 
Producttwo-component sensor 
Protein accessionYP_792528 
Protein GI116048672 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.452392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGATG CCGGCAGTCT GCGCGGACGG CTGCTGCTGT GGCTGGCCCT GCTCCTGCTG 
CTGGTGCTCC TGGCGAGCGG CCTGAGCGCC TACTGGAACG GCCGCGAGGT GGCCGACACC
GCCTACGACC GGACCTTGCT GGCCTCGGCG CGGGCGATCG CCGACGGGCT CTACGAGAAG
GACGGCACCC TGCGCGCCGA CGTCCCCTAC GTGGCGCTGG ATACCTTCGC CTACGACAGC
GCCGGGCGGA TCTTCTACCA GGTCAACGAC ATCCATGGTC GGATGATCTC CGGCTACGAG
AATCTTCCGG CAGCACCCGC CGAGACCCTG CGCACCGACG ACTACCCGGC CTTGGCGAAG
TTCTACGACG GCGTCTACCA GGGCGTCGAC GTACGCGTGG TGAGCCTGCT GCAGCCGGTC
AGCGAACCGA GCATGAGCGG CATGGCGGAG ATCCGCGTGG CCGAGACCGA AGGCGCCCGC
GAGCGCATGG CGCGCAGCCT GATGACCGAT ACCCTGTTGC GCCTGGGCGT CCTCGGCGTC
GGCGCGCTGG TGCTGGTGTG GCTGGCGGTG AGCGCCGCGC TGCGTCCGCT GGATCGCCTG
CGCCGCGAGG TGGAAGAGCG CCAGCCGGAC GATCTGCGGC CGTTGCCGAT GCTCGAGGTC
CAGCATGAAT TGCGGCCGCT GGTGGAGTCG CTGAACCACT TCACCCAGCG CCTGCGCAGC
CTGTTCGAGC GGCAGTCGCA GTTCATCGCC GATGCCGCCC ACGAGTTGCG CACGCCGCTG
GCGGCGCTCA AGGCGCGCCT GGAACTGGGC CTGCGTGAGC AGGAGCCGGA AGCCTGGCGT
TCGACCCTGG AGACCACGGC GAAGAACACC GACCGCCTGA TCCATCTGGC CAACCAGCTG
CTCTCCCTGG CGCGCATCGA AAGCGGCGCC CAGGCCATCG CCGAGGGCGG CGCCGAGCGT
ATCGACCTGA CCGCCCTGGC CCGGGAACTG GGCCTGGCGC TGGCGCCGCT GGCCTATGCG
CGGGGAGCCT CGCTGGCGCT GGAAAGCGCC GGGCCGGTGT GGATCCAGGG TGAACCGACG
CTGCTCAACG AATTGCTCAG CAACCTGCTG GACAACGCGC TGGCGCACAC CCCGCAGGGC
GGCAACGTGA TCCTCAGGGT GCTGGAGGGG GGAGTGCTGG AAGTGGAAGA CGATGGTCCG
GGAATTCCCG CCGCCGACCG CGAGCGGGTC TTCCAGCGCT TCTACCGGCG CGGCGACAGC
CCCGGCAGCG GCCTGGGGCT GGCGATCGTC GGCGAGGTCT GCCGGGCGCA CCGGGCGCAG
ATCCAGCTCG ACCAGGGCGA ACTGGGCGGC TTGCTGGTGC GGGTGCGCTT CCCGGCGGAG
TAG
 
Protein sequence
MTDAGSLRGR LLLWLALLLL LVLLASGLSA YWNGREVADT AYDRTLLASA RAIADGLYEK 
DGTLRADVPY VALDTFAYDS AGRIFYQVND IHGRMISGYE NLPAAPAETL RTDDYPALAK
FYDGVYQGVD VRVVSLLQPV SEPSMSGMAE IRVAETEGAR ERMARSLMTD TLLRLGVLGV
GALVLVWLAV SAALRPLDRL RREVEERQPD DLRPLPMLEV QHELRPLVES LNHFTQRLRS
LFERQSQFIA DAAHELRTPL AALKARLELG LREQEPEAWR STLETTAKNT DRLIHLANQL
LSLARIESGA QAIAEGGAER IDLTALAREL GLALAPLAYA RGASLALESA GPVWIQGEPT
LLNELLSNLL DNALAHTPQG GNVILRVLEG GVLEVEDDGP GIPAADRERV FQRFYRRGDS
PGSGLGLAIV GEVCRAHRAQ IQLDQGELGG LLVRVRFPAE