Gene PA14_54480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54480 
Symbol 
ID4385209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4829610 
End bp4830554 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content69% 
IMG OID639326967 
Producthypothetical protein 
Protein accessionYP_792526 
Protein GI116048674 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.812982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC CCGCTTTCCA CACCCCGCTA GTCCATGAAG GCATCCTCGC CGTCCGCGGC 
CCGGACGCCG CCAAATTCCT CCAGGGCCAG CTGACCTGCA ACCTCGCCTA CCTGAACGAC
GAGACCTCCA GCCTCGGCGG CCGCTGCAAC ATCAAGGGCC GCCTGCTATC GAGCTTCCGC
ATCCTGCCCG AGGGCGACGG CCTGCTGCTG GCGATGGCCG GCGAGCTGCT CGAGGCCCAG
TTGGCGGACC TGAAGAAATA CGCCGTATTC TCCAAGGCCA GCCTTGCCGA CGAGAGCGCA
GCCTGGCTCC GCATAGGCTT GCGCGACGCC AGCGAGGCAC TGCGCGCCCT GGGGATAGAC
ACCCCGGCGG AGAGCGGCAG GATCGCCCGC CACGGCGACC TGCTCGCCGT CGCCCTGGGC
GACGCCCGCG TCGAGCTATG GGTTCCGGCG CAGCGCGCCG AGGCGGTGCT TGCCAGGCTC
CGCGAGCACA GCCGCGAGGC GCCGCTCGAC GATTGGCTGC TCGGCCAGGT GCGCGCAGGC
ATCGGCCAGG TGTTCGGCGC TACCCGCGAG CTGTTCATCC CACAGATGAT CAACCTGCAG
GCGGTCGGCG GGGTCAGCTT CAAGAAGGGC TGCTATACCG GCCAGGAAAT CGTCGCCCGC
ATGCAGTATC TCGGCCGCCT CAAGCGCCGC CTGTATCGCC TGGCGCTGGA CGCAGACGAG
GTGCCGGCGC CCGGCACCGG GCTGTTCTCG CCGGTCCATT CCACCAGCGT CGGCGAAGTG
GTACTGGCCG CCCGTACGCC GGAGAACAGC GTGGAATTGC TCGCCGTGCT GCAGGACGAC
GCCGTCGCCG ACGGCCGGAT CAGCCTCGGA AGCGCCGAAG GAGCGCCGCT CGTCCTCCTC
AATCTGCCTT ACACGCTGGA CAGCGACCGC GAAATCCAGC GCTGA
 
Protein sequence
MADPAFHTPL VHEGILAVRG PDAAKFLQGQ LTCNLAYLND ETSSLGGRCN IKGRLLSSFR 
ILPEGDGLLL AMAGELLEAQ LADLKKYAVF SKASLADESA AWLRIGLRDA SEALRALGID
TPAESGRIAR HGDLLAVALG DARVELWVPA QRAEAVLARL REHSREAPLD DWLLGQVRAG
IGQVFGATRE LFIPQMINLQ AVGGVSFKKG CYTGQEIVAR MQYLGRLKRR LYRLALDADE
VPAPGTGLFS PVHSTSVGEV VLAARTPENS VELLAVLQDD AVADGRISLG SAEGAPLVLL
NLPYTLDSDR EIQR