Gene PA14_54080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54080 
Symbol 
ID4384737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4794649 
End bp4797774 
Gene Length3126 bp 
Protein Length1041 aa 
Translation table11 
GC content68% 
IMG OID639326937 
Producthypothetical protein 
Protein accessionYP_792496 
Protein GI116048704 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGCG CAGCTACAGG CGGTGCGAGC ATGGGTGCAT CAGAACGATC CACGAACGAC 
CCTTCCGAGC TGCAACCCTG CAGTCTCCCT GCCTCCGCTT CTCCTCGAAA AAGCCGTCTC
CGCCAACGCC TGATGCTGAT CGGCTTCGCC TTGCCGATCC TCGCCGCGGT GGGCATCGTG
GTACTTCACG AAGCGCACAC CTCGCGGCTG CAGGCACGCG AGCTGGCACG CTACGCCGCG
ACCCTGGACT ACGAGGTGCG CCAGGGTCCC AGCGAGGCCA TCCTGTTCCC GGCGGACGGC
CCCTTCGACC GCCGCCTCGG CTACCAGTTG CTGCCTTCGT TCATGCAGCG CCTGTACGAC
CGCGACTACG CCATCACCCG CCAGGCGCAC TTCTCCCCGG CGCTGATGCG CTACGCCGAA
CACCGGCTGT TCCCGCCCTA CGCGGAAAAG GCCCAGGCCG GGCTGGACAT CGCCGATTGC
CGCGGCGTGC CGATCTACGA CTTCCGCTAT CCGCAACGGC GCTACGCGAA CTTCGCCAGC
CTGCCGCCGC TGGCGGTGCA GAGCCTGCTG TTCATCGAGA ACCGCGACCT GCTCGATCAC
GAACGCCCCT ACCTCAACCC GGCGGTGGAC TGGGGTCGCT TCACCCAGGC GGCGCTGTCG
CAGGTCGGCA AGATGCTCGG CTTCAGCGCG CACTCCTCCG GCGGCAGCAC CCTGGCGACC
CAGATCGAGA AATACCGCCA CTCTGCCGAA GGGCGCACCG GCAGCATCGG CGACAAGCTG
CGGCAGATGC TCTCGGCCAG CGTACGCAGC TATCGCGAAG GCCCGGCCAA CTTCGCCGCG
CGCCAGGACA TCGTGCTCAC CTACCTCAAC TCGGTGCCGC TATCGGCGGC GCCGGGCTAC
GGCGAGGTCA CCGGCCTGGC CGATGGCCTG TGGGTCTGGT ACGGCGCCGA CTACCGGCAG
GTCGGCGAGG CCCTCGACGG CAAGGCCGGA CTCGCCGCCC AGGGCCTGGC CCTGCGCCAG
GTGCTGGCGC TGATGATCGC CCACCGCCGG CCTTCCTTCT ATCTGGCGCC GCGCGGCCGC
GACGAGCTGG ACCGGATGAC CGACAGCCAC CTGCGGGTCC TGACCCAGGC CGGCGTCATC
GAGGCGCCGT TACGCGATGC GGCGCTGGCG CAGAAGCTGG CGTTCCGCGA CCCACGCAGC
CAGCCGACGG TGCAACCGCT GCCGACCAAC AAGGGCGTGA CCCTGGCTCG CACCCGCCTG
GCCGGGATGC TCGGCGTGCC ACTGTACGAC CTCGACCGTC TCGACCTGCG GGCCAATACC
ACCCTCCAGC ACGAGTTGCA GGAAAGCGTC ACCGCCTACT TGCAGAAACT CGCCGACCCG
GACTACGCCG CCCAACTCGG GCTGATCGGC GAACGCCTGC TGACCCCGAC CTCGACCCGC
TCGGTACGCT ACAGCTTCAC CCTGTTCGAA CGTACGCCGA GCGGCAACCA GGTGCGGGTG
CAGACCGACA ACACCGACCA GCCCTTCGAC ATCAACGAAG GCAGCAAGCT GGAGCTGGGC
TCCACCGCCA AGCTACGGGT GCTGGCCAGC TACCTGGAGA CCGTCGCGCA GATCCACCGC
GACTATGGCG GCATGAGCGT CGCCGAGCTG CGCAAGGTGG AAGTGGAGCC GCTCGATTTC
ATCCTCCGCT GGGGCATCGA CCACCTGGTG GCCAGCCGCG ACCGCGATCT TTCCGCGATG
CTCCAGGCGG CCATGGAACG GCGCTATTCG GCCAGCCCCT ACGAGAGCTT CTTCACCGGC
GGCGGGCTGC ACACCTTCAA CAACTTCCGC AAGGAAGACA ACGGCCGCCG GCCGATGCTG
CTGGAAGCCC TGCGCGAATC GATCAACCTG CCCTTCGTGC GCCTGCTGCG CGACCTGATC
CGCCACGACA TCTACCAGAA CGCCGGGAGC AAGGTGCAAT TGCTGGCCGA CGACAAGGAC
CCGCGCCGCG CCGACTACCT CGACCGTTTC GTCGACAAGG AAAGCCAGGT CTACCTGCGC
CGCTTCTGGG TCAAGTACCG CGACAAGGAC GCCAACCAGC GCCTGGAGAC CTTCCTCGAC
GGCCTGCGTC CCTGGCCGGT GCGGCTGGCT GCGATCCATC GCTACCTGCA GCCACAGGCC
GACCTGGCGA GCTTCAGCGC CTTCCTCCGC GAACGCCTGC CCCGCGGCAG CCTGACCGAC
AAGCGCGCCG CCGAGCTGTA CGAGCGCTAC GGCCCGGGCA AGTTCAACCT CAACGACCAG
GGCTACGTCG CCCGCGTGCA CCCGCTGGAG CTATGGCTGC TCGGCTATCT GCAGAAGCAG
CCGCAGGCGA CCTTCGGCGA GGCGGTGGCG GCCAGCGGCG CCGAGCGCAA GGAAGTCTAC
GGCTGGCTGT TCAAGTCGCG GCACAAGAAC GCCCGCGACA AGCGCATCCG CATCCTGCTG
GAGGTGGAGG CCTTCCTCGA CCTGCACCAG CAATGGAAGA AACTCGGCTA TCCCTTCGAT
CACCTGGTGC CGTCCTACGC CACCGCCCTG GGCAGCTCCG GCGACCGCCC GGCGGCGCTG
GCCGAACTGA TGGGGATCAT CGTCAACGAT GGCGTGCGCA TGCCGACCCT GCGCCTGGAG
CACCTCGACT TCGCCCTGGG TACGCCCTAC GAGACGCGCT TCGCCCCGGA AGCCACCCTC
GGCCAGAGAG TGATGACCTC GGAGGTCGCC GCCACCCTGC GCAACGCGCT GTCCCAGGTG
GTCGACGCCG GCACCGCGCG GCGCCTGCAA GGCACCTTCA GCCGTCCGGA CGGCGCGCCG
CTGGTGATGG GCGGCAAGAC CGGCACCGGC GACAACCGCC TGCAGACCTT CAGCGCCGGC
GGCCACGTGC GCAGTTCGAA GGCACTGAAC CGCACCGCCA CTTTCGTCTT CTACATCGGC
CCGCGGCACT TCGGTACCCT CACCGCCTAC GTCGACGGCA GCGAGTCGAG CCAGTTCAAG
TTCACCTCGG CCCTGCCGGT GCAGGTACTC AAGGGCATGG CACCGCTCCT CAGGGACTAC
CTCGACCCAC GCACCGCCAC CCGCTGCCAG GTACCGTTGT CGCCGCAACA GATCGGCCGC
CTGTAG
 
Protein sequence
MNCAATGGAS MGASERSTND PSELQPCSLP ASASPRKSRL RQRLMLIGFA LPILAAVGIV 
VLHEAHTSRL QARELARYAA TLDYEVRQGP SEAILFPADG PFDRRLGYQL LPSFMQRLYD
RDYAITRQAH FSPALMRYAE HRLFPPYAEK AQAGLDIADC RGVPIYDFRY PQRRYANFAS
LPPLAVQSLL FIENRDLLDH ERPYLNPAVD WGRFTQAALS QVGKMLGFSA HSSGGSTLAT
QIEKYRHSAE GRTGSIGDKL RQMLSASVRS YREGPANFAA RQDIVLTYLN SVPLSAAPGY
GEVTGLADGL WVWYGADYRQ VGEALDGKAG LAAQGLALRQ VLALMIAHRR PSFYLAPRGR
DELDRMTDSH LRVLTQAGVI EAPLRDAALA QKLAFRDPRS QPTVQPLPTN KGVTLARTRL
AGMLGVPLYD LDRLDLRANT TLQHELQESV TAYLQKLADP DYAAQLGLIG ERLLTPTSTR
SVRYSFTLFE RTPSGNQVRV QTDNTDQPFD INEGSKLELG STAKLRVLAS YLETVAQIHR
DYGGMSVAEL RKVEVEPLDF ILRWGIDHLV ASRDRDLSAM LQAAMERRYS ASPYESFFTG
GGLHTFNNFR KEDNGRRPML LEALRESINL PFVRLLRDLI RHDIYQNAGS KVQLLADDKD
PRRADYLDRF VDKESQVYLR RFWVKYRDKD ANQRLETFLD GLRPWPVRLA AIHRYLQPQA
DLASFSAFLR ERLPRGSLTD KRAAELYERY GPGKFNLNDQ GYVARVHPLE LWLLGYLQKQ
PQATFGEAVA ASGAERKEVY GWLFKSRHKN ARDKRIRILL EVEAFLDLHQ QWKKLGYPFD
HLVPSYATAL GSSGDRPAAL AELMGIIVND GVRMPTLRLE HLDFALGTPY ETRFAPEATL
GQRVMTSEVA ATLRNALSQV VDAGTARRLQ GTFSRPDGAP LVMGGKTGTG DNRLQTFSAG
GHVRSSKALN RTATFVFYIG PRHFGTLTAY VDGSESSQFK FTSALPVQVL KGMAPLLRDY
LDPRTATRCQ VPLSPQQIGR L