| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_54000 |
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| Symbol | prpD |
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| ID | 4381659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4788579 |
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| End bp | 4790063 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639326931 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_792490 |
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| Protein GI | 116048710 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCA ACGTCGATCT CAACCAACGT CCCGACTACG ACGCCGTCCT GCAGGACATC
GCCGACTACG TGCTGGACTA CCGCATCGAT TCCGCGGAGG CCCTGGACAC CGCCCGCAAC
TGCCTGATGG ATACCCTCGG CTGCGGCCTG CTGGCGCTGC GCTTCCCGGA ATGCACCAAG
CACCTCGGCC CGCTGGTCGA GGGCACCCTG GTCCCGCACG GCGCGCGGGT GCCGGGCACC
TCCTTCCGGC TCGACCCGGT CAAGGCCGCC TGGGACATCG GCTGCATCGT CCGCTGGCTG
GACTACAACG ACACCTGGCT GGCCGCCGAG TGGGGCCATC CCTCGGACAA CCTCGGCGGC
ATCCTCGCCG TCGCCGACCA CCTCTCGCAG AAACGCCTGG CCAACGGCGA AGCGCCGCTG
AGCATGCGCC AGGTACTGGA AGCGATGATC ATGGCCCACG AGATCCAGGG CGTGATCGCC
CTGGAGAACT CGTTCAATCG CGTCGGCCTC GACCATGTGC TGCTGGTCAA GGTCGCGTCC
ACCGCCGTCT GCGCCAAGCT GATGGGGGCC GACCGCGAGC AACTGCTGGC CGCCCTCTCC
CACGCCTTCG TCGACGGCCA GGCCCTGCGC ACCTACCGTC ACGCACCGAA CGCCGGCTCG
CGCAAGTCCT GGGCCGCTGG CGACGCGACG AGCCGCGGCG TACGCCTGGC GGACATCGCC
TTGCGCGGCG AGATGGGCAT CCCCGGCGTG CTCAGCGCGC CGCAGTGGGG TTTCTACGAT
GTCCTGTTCA GCCACACCAG CAAGGACCTG GCGACCAAGC CCGAGGACAA GCGGCGCTTC
AGCTTCCCCC AGGGCTACGG CAGCTACGTG ATGGAAAACG TGCTGTTCAA GATCAGCTTC
CCCGCCGAAT TCCACGCGCA GACCGCCGCC GAGGCCGCCG TGCGCCTGCA TCCGCTGGTG
AAGGACCGCC TGCAACGGAT CAGCCGCATC GTCATCACCA CCCACGAGTC GGCGATCCGC
ATCATTTCCA AGGTCGGCCC GCTGGCCAAC CCCGCCGACC GCGACCATTG CCTGCAGTAC
ATGACCGCCG TGCCGCTGAT CTTCGGCGAC CTGGTGGCCG AGCACTACGA GGACGCCTTC
CACGCCGCCC ACCCGCTGAT CGACCGCTTG CGCGAGAAAA TGGAGATCGT CGAGGAGCCG
CGCTACAGCC GTGAATACCT GGAGGCGGAC AAGCGCTCCA TCGCCAACGC CCTGGAAGTG
TTCTTCGACG ACGGCAGCAG CACCGGCCAG GTCGCCGTGG AGTACCCGCT CGGCCATCGC
CGCCGGCGCG CCGAAAGCAT TCCGCTGCTG CAGGAGAAGT TCAAGGCCAA CCTGGCCACG
CGCTTCCCGC CGCAGCGCTG CCAAAGGATC TTCGACCTGT GCAGCCACCA GGCGTCACTG
GAAGCCACGC CGGTGAACCG CTTCATGGAC CTCCTGGCGA TCTGA
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| Protein sequence | MSANVDLNQR PDYDAVLQDI ADYVLDYRID SAEALDTARN CLMDTLGCGL LALRFPECTK
HLGPLVEGTL VPHGARVPGT SFRLDPVKAA WDIGCIVRWL DYNDTWLAAE WGHPSDNLGG
ILAVADHLSQ KRLANGEAPL SMRQVLEAMI MAHEIQGVIA LENSFNRVGL DHVLLVKVAS
TAVCAKLMGA DREQLLAALS HAFVDGQALR TYRHAPNAGS RKSWAAGDAT SRGVRLADIA
LRGEMGIPGV LSAPQWGFYD VLFSHTSKDL ATKPEDKRRF SFPQGYGSYV MENVLFKISF
PAEFHAQTAA EAAVRLHPLV KDRLQRISRI VITTHESAIR IISKVGPLAN PADRDHCLQY
MTAVPLIFGD LVAEHYEDAF HAAHPLIDRL REKMEIVEEP RYSREYLEAD KRSIANALEV
FFDDGSSTGQ VAVEYPLGHR RRRAESIPLL QEKFKANLAT RFPPQRCQRI FDLCSHQASL
EATPVNRFMD LLAI
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