| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53950 |
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| Symbol | prpC |
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| ID | 4381662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4783274 |
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| End bp | 4784401 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639326928 |
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| Product | methylcitrate synthase |
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| Protein accession | YP_792487 |
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| Protein GI | 116048713 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.282102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAG CAAAAGTACT GAGTGGCGCC GGCCTGCGTG GCCAGGTGGC CGGCCAGACA
GCCCTGTCCA CCGTCGGCCA GGAAGGCGCC GGCCTGACCT ACCGTGGCTA CGACGTCCGC
GACCTGGCGG CGGCGGCGAT CTTCGAGGAA GTCGCCTACC TGCTGCTCTA CGGCGAACTG
CCGAACAAGC AACAGCTCGA CGCCTACCTG AAGAAGCTCC AGGGCCAGCG CGACCTGCCG
CAGGCGCTGA AGGAAGTTCT CGAACGGATT CCCAAGGACG CCCACCCGAT GGACGTGATG
CGCACTGGCG CCTCGGTCCT CGGCACCCTG GAACCGGAGC TGAGCTTCGA CCAGCAGCGC
GACGTCGCCG ACCGCCTGCT CGCCGCCTTC CCGGCGATCA TGACCTACTG GTACCGCTTC
ACCCACGAAG GCCAGCGCAT CGACTGCAAC AGCGACGAGC CGACCATCGG CGGGCACTTC
CTCGCCCTGC TCCACGGCAA GAAGCCCAGC GAGCTGCACG TGAAGGTGAT GAACGTCTCG
CTGATCCTCT ACGCCGAGCA TGAGTTCAAC GCATCCACCT TCACCGCGCG GGTTTGCGCC
TCGACCCTGT CCGACCTGTA CTCCTGCGTC ACCGGCGCCA TCGGCTCGCT GCGCGGCCCG
CTGCACGGCG GCGCCAACGA GGCGGCGATG GAACTGATCG AACGCTTCTC TTCGCCGCAG
GAAGCCACCG CCGAGCTGCT GAAGATGCTC GAGCGCAAGG ACAAGATCAT GGGCTTCGGG
CATGCCATCT ACAAGGATTC CGACCCACGC AACGAAGTGA TCAAGGGTTG GTCGAAGCAG
CTCGCCGACG AGGTCGGCGA CAAGGTCCTG TTCGCGGTTT CCGAGGCCAT CGACAAGACC
ATGTGGGAGC AGAAGAAGCT GTTCCCCAAC GCCGACTTCT ACCACGCCTC GGCGTATCAC
TTCATGGGCA TCCCGACCAA GCTGTTCACG CCGATATTCG TCTGCTCGCG GACCAGCGGC
TGGACCGCCC ACGTCTTCGA ACAGCGCGCC AACAACCGCA TCATCCGCCC GAGCGCCGAG
TACACCGGCG TCGAGCAGCG CGCGTTCGTG CCGCTGGAGC AACGCTGA
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| Protein sequence | MAEAKVLSGA GLRGQVAGQT ALSTVGQEGA GLTYRGYDVR DLAAAAIFEE VAYLLLYGEL
PNKQQLDAYL KKLQGQRDLP QALKEVLERI PKDAHPMDVM RTGASVLGTL EPELSFDQQR
DVADRLLAAF PAIMTYWYRF THEGQRIDCN SDEPTIGGHF LALLHGKKPS ELHVKVMNVS
LILYAEHEFN ASTFTARVCA STLSDLYSCV TGAIGSLRGP LHGGANEAAM ELIERFSSPQ
EATAELLKML ERKDKIMGFG HAIYKDSDPR NEVIKGWSKQ LADEVGDKVL FAVSEAIDKT
MWEQKKLFPN ADFYHASAYH FMGIPTKLFT PIFVCSRTSG WTAHVFEQRA NNRIIRPSAE
YTGVEQRAFV PLEQR
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