Gene PA14_53730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53730 
Symbol 
ID4382808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4763392 
End bp4764345 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content70% 
IMG OID639326908 
Producttranscriptional regulator 
Protein accessionYP_792467 
Protein GI116048733 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000890377 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00908893 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGACC TGGTGATGCT CAAGGACTTC CTCGTCCTCT GTCGGATCAA GAGCTTCAGC 
CGTGCGGCGC AGGAGTGCCA TGTCTCCGTG TCCGGGCTCA GCCGGCGTAT CCAGACCCTG
GAACAGTGGC TCGGTGCACC GGTGTTCGAG CGCCACAAGC ACGCCCTCGA ACTGACCGAG
GCCGGCCGCC AGCTGCAAGG CGTGGCGCAG GACGCGGTGC GCGCCCTGGA CAACCTGCGC
CAGTCGATCC GCGAGCGCGA CGAGGACGCC CAGCGGCGCA TCCGTTTCTG CGCCCCGCAC
ATCCTCTCCT CGGTGTTCTT CCCGCACTGG ATTCCGCGCC TGCAGGCGGA CTTCCGCAGC
GCCAAGTTCA GCGTCGACTG CGATTACCTG CCGCAATGCC TGTCGCGCCT GCGCGGCGGC
TCGGTGGACT ACGTGGTGGC GTTGCTCGAC GAAGGCGAGG CGGTGTCGCG CCGCCTGGGC
ATCGACAGCG AAGCCGAGTT CCAGCGCCTG GAGCTTGGCC ACGAACAACT GGTGGCGGTC
TGCGCGCCGG ACGCCGCCGG CCAGCCGTTG TTCAACCTCG ACCGCCTGCA GACCGAAGCG
CTATCGTTCC TCGGCTACTC CGAGGAATGC CACCTGGGCT GGGCCCTGGA ACCGCTGCTG
CGCGACAGCG GCCTGTTCCT CCAGCGCCAT CACAGTTCCA GCCAGACCGA GGGGCTGCGC
TTCTTCGCCC AGTCGCGCCT GGGCGTCGCC TGGCTGCCGC ATACCCTGGT CCGCGAGGAC
CTCGCCAGCC GTCGCCTGGT GCGCGCCGGC GGCCAGCGCT TCGACGTACC GCTGCGCTAC
ACCCTGATCC GTCGCCGCCT GCCGCTACCC GGCGAGGCCG AACGCCTGTG GACCTTCCTC
GGCGAGCTGG CGCGCCCGGC GCCGCGCTAC GCGGTGGTCG GCGCGGCCTC CTGA
 
Protein sequence
MIDLVMLKDF LVLCRIKSFS RAAQECHVSV SGLSRRIQTL EQWLGAPVFE RHKHALELTE 
AGRQLQGVAQ DAVRALDNLR QSIRERDEDA QRRIRFCAPH ILSSVFFPHW IPRLQADFRS
AKFSVDCDYL PQCLSRLRGG SVDYVVALLD EGEAVSRRLG IDSEAEFQRL ELGHEQLVAV
CAPDAAGQPL FNLDRLQTEA LSFLGYSEEC HLGWALEPLL RDSGLFLQRH HSSSQTEGLR
FFAQSRLGVA WLPHTLVRED LASRRLVRAG GQRFDVPLRY TLIRRRLPLP GEAERLWTFL
GELARPAPRY AVVGAAS