Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53730 |
Symbol | |
ID | 4382808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4763392 |
End bp | 4764345 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326908 |
Product | transcriptional regulator |
Protein accession | YP_792467 |
Protein GI | 116048733 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000890377 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00908893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGACC TGGTGATGCT CAAGGACTTC CTCGTCCTCT GTCGGATCAA GAGCTTCAGC CGTGCGGCGC AGGAGTGCCA TGTCTCCGTG TCCGGGCTCA GCCGGCGTAT CCAGACCCTG GAACAGTGGC TCGGTGCACC GGTGTTCGAG CGCCACAAGC ACGCCCTCGA ACTGACCGAG GCCGGCCGCC AGCTGCAAGG CGTGGCGCAG GACGCGGTGC GCGCCCTGGA CAACCTGCGC CAGTCGATCC GCGAGCGCGA CGAGGACGCC CAGCGGCGCA TCCGTTTCTG CGCCCCGCAC ATCCTCTCCT CGGTGTTCTT CCCGCACTGG ATTCCGCGCC TGCAGGCGGA CTTCCGCAGC GCCAAGTTCA GCGTCGACTG CGATTACCTG CCGCAATGCC TGTCGCGCCT GCGCGGCGGC TCGGTGGACT ACGTGGTGGC GTTGCTCGAC GAAGGCGAGG CGGTGTCGCG CCGCCTGGGC ATCGACAGCG AAGCCGAGTT CCAGCGCCTG GAGCTTGGCC ACGAACAACT GGTGGCGGTC TGCGCGCCGG ACGCCGCCGG CCAGCCGTTG TTCAACCTCG ACCGCCTGCA GACCGAAGCG CTATCGTTCC TCGGCTACTC CGAGGAATGC CACCTGGGCT GGGCCCTGGA ACCGCTGCTG CGCGACAGCG GCCTGTTCCT CCAGCGCCAT CACAGTTCCA GCCAGACCGA GGGGCTGCGC TTCTTCGCCC AGTCGCGCCT GGGCGTCGCC TGGCTGCCGC ATACCCTGGT CCGCGAGGAC CTCGCCAGCC GTCGCCTGGT GCGCGCCGGC GGCCAGCGCT TCGACGTACC GCTGCGCTAC ACCCTGATCC GTCGCCGCCT GCCGCTACCC GGCGAGGCCG AACGCCTGTG GACCTTCCTC GGCGAGCTGG CGCGCCCGGC GCCGCGCTAC GCGGTGGTCG GCGCGGCCTC CTGA
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Protein sequence | MIDLVMLKDF LVLCRIKSFS RAAQECHVSV SGLSRRIQTL EQWLGAPVFE RHKHALELTE AGRQLQGVAQ DAVRALDNLR QSIRERDEDA QRRIRFCAPH ILSSVFFPHW IPRLQADFRS AKFSVDCDYL PQCLSRLRGG SVDYVVALLD EGEAVSRRLG IDSEAEFQRL ELGHEQLVAV CAPDAAGQPL FNLDRLQTEA LSFLGYSEEC HLGWALEPLL RDSGLFLQRH HSSSQTEGLR FFAQSRLGVA WLPHTLVRED LASRRLVRAG GQRFDVPLRY TLIRRRLPLP GEAERLWTFL GELARPAPRY AVVGAAS
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