Gene PA14_53670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53670 
Symbol 
ID4382813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4760148 
End bp4760960 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID639326903 
Producthypothetical protein 
Protein accessionYP_792462 
Protein GI116048738 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000043823 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0011481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCCG TTATCGCTGA GAATGATGTG TCGATCTGGG ACGACGAAAC TGGAGCTGTC 
TACCACTACC CAAGGCGATA CAGCGCCATC CTTAAGCCAG GGGTGCAGGT GGTTTACTAC
AAGGGCAAGC TGACAGATAA GTCCTTTGCT GATCAGCGCC TCAGTGCTCA GCCGCATTAC
TTTGGTATTG CGCGTATCGG CAAGGTTTAC CCTGACCTTG AAAGCTCGAA AGGTGATCTC
TTCGCGTTGA TCGAGAGTTT TCAGCCATTT GAGCAGGCAG TCCTGGCAAA AGAAGGGAAT
AGCTACCTAG AGCCCATTCC GCCATCGAAG GCCAGCAACT ACTGGCGTAG TGGTGTCCGG
GAGATTGGAC AGGTCACCTT TGATAGCATC CTGGCAAGGG CCGAGATTAA GCCTTTGCAG
GTTGCCGAGA GTTGGGGCGA TAGAGCTTTG GGGGGCTTTG AGTCTCGCAC CGAGGGCAGT
CTGTCCACCT ACTACGGGGT CCGCTACGAG CGTGACCCAA CGCTGCGTCT CCAGGCAATT
GCGATTCATG GTGTAGCTTG CAAGGCGTGC GGTTTTGATT TCGGAAAGGC ATACGGCGAG
TACGCGAAGG GTTTTATCCA CGTTCACCAC ACGCAGCCCA TTTCTGAGTT CGAAGCCCCC
AAAGCCGTGA ACCCTGAAAC TGACCTGGTG CCCCTCTGTG CAAATTGCCA TGCAGTTGTT
CATCGCAGGC GTGATCGAAC TCTTAGCGTC GATGAGCTGA AGGGGCTTGT TCGTGGGAGG
TGGGTTTGCG CGGAGGCTGA TGTAGTCGTT TAG
 
Protein sequence
MPAVIAENDV SIWDDETGAV YHYPRRYSAI LKPGVQVVYY KGKLTDKSFA DQRLSAQPHY 
FGIARIGKVY PDLESSKGDL FALIESFQPF EQAVLAKEGN SYLEPIPPSK ASNYWRSGVR
EIGQVTFDSI LARAEIKPLQ VAESWGDRAL GGFESRTEGS LSTYYGVRYE RDPTLRLQAI
AIHGVACKAC GFDFGKAYGE YAKGFIHVHH TQPISEFEAP KAVNPETDLV PLCANCHAVV
HRRRDRTLSV DELKGLVRGR WVCAEADVVV