Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53670 |
Symbol | |
ID | 4382813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4760148 |
End bp | 4760960 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639326903 |
Product | hypothetical protein |
Protein accession | YP_792462 |
Protein GI | 116048738 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000043823 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0011481 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCCG TTATCGCTGA GAATGATGTG TCGATCTGGG ACGACGAAAC TGGAGCTGTC TACCACTACC CAAGGCGATA CAGCGCCATC CTTAAGCCAG GGGTGCAGGT GGTTTACTAC AAGGGCAAGC TGACAGATAA GTCCTTTGCT GATCAGCGCC TCAGTGCTCA GCCGCATTAC TTTGGTATTG CGCGTATCGG CAAGGTTTAC CCTGACCTTG AAAGCTCGAA AGGTGATCTC TTCGCGTTGA TCGAGAGTTT TCAGCCATTT GAGCAGGCAG TCCTGGCAAA AGAAGGGAAT AGCTACCTAG AGCCCATTCC GCCATCGAAG GCCAGCAACT ACTGGCGTAG TGGTGTCCGG GAGATTGGAC AGGTCACCTT TGATAGCATC CTGGCAAGGG CCGAGATTAA GCCTTTGCAG GTTGCCGAGA GTTGGGGCGA TAGAGCTTTG GGGGGCTTTG AGTCTCGCAC CGAGGGCAGT CTGTCCACCT ACTACGGGGT CCGCTACGAG CGTGACCCAA CGCTGCGTCT CCAGGCAATT GCGATTCATG GTGTAGCTTG CAAGGCGTGC GGTTTTGATT TCGGAAAGGC ATACGGCGAG TACGCGAAGG GTTTTATCCA CGTTCACCAC ACGCAGCCCA TTTCTGAGTT CGAAGCCCCC AAAGCCGTGA ACCCTGAAAC TGACCTGGTG CCCCTCTGTG CAAATTGCCA TGCAGTTGTT CATCGCAGGC GTGATCGAAC TCTTAGCGTC GATGAGCTGA AGGGGCTTGT TCGTGGGAGG TGGGTTTGCG CGGAGGCTGA TGTAGTCGTT TAG
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Protein sequence | MPAVIAENDV SIWDDETGAV YHYPRRYSAI LKPGVQVVYY KGKLTDKSFA DQRLSAQPHY FGIARIGKVY PDLESSKGDL FALIESFQPF EQAVLAKEGN SYLEPIPPSK ASNYWRSGVR EIGQVTFDSI LARAEIKPLQ VAESWGDRAL GGFESRTEGS LSTYYGVRYE RDPTLRLQAI AIHGVACKAC GFDFGKAYGE YAKGFIHVHH TQPISEFEAP KAVNPETDLV PLCANCHAVV HRRRDRTLSV DELKGLVRGR WVCAEADVVV
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